Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra1g1581 ATGAAGAGTTTTCTATTGGGATGTGTGGCCATTGTGGAGAAAAATAAACCTTATGTTGCAATGTGTTTTGTTCAGTTTGTGTATGCAGGAATGGCCTTGTTGTCCAAAGCTGCAATCTCCAAGGGAATGAGCCCTTACGTGTTTGTTGTTTATAGACAAGCCTTTGCATCAGTTGCTCTCTCTCCATTTGCTTTCTTTGACAGTAAGCAATCAGCACCTTTGTCATGCAACTTGTTGTGCAAATTGTTCCTAATTTCTCTTGTTGGGTTAACTGTGAGTTCAAACCTTTACTATGTTTCAATCAACTACACCACTGCAACATTTGCTGCAGCCTCCTCAAACACTATCCCTGCCATTACTTTCATCATGGCTCTTTTAATCAGGGTGGAAAGCATTTCCATAAAACGTTCACATGGTATAGCAAAGATTTTGGGCTCTGTTCTGAGCCTTTCTGGAGCAATTACATTTGGTTTAGTGAAGGGACCTCCCCTGAGTTTTATGAAATGGTATCAACAAAACCAGAATCAAACTTCTTCCACAATTGTTCATTACAAAGTTGACATCATTAGAGGCCCTCTCATGATGCTCGCAGCAAACATTACATGGTCCTTGTGGCTTATCTTGCAGGGATTTGTTGTGAAGCAGTACCCTGCAAAACTTCGTCTCACAGCTCTGCAATGCTTCTTCAGCTTCATGCAGTCTACTGTCGTGGCTGTTGCAGTTGAGAGGCATAATCCTTCGGCATGGAAGCTTGGATGGGATATTCATCTTCTTTCTGTGGCATACTGTGGTGTAGTTGTAACAGGCATTTGTTATTGGCTGCAAGTCTGCACAATAGAAACTAAAGGCCCAGTTTTCACAGCAATGTTCACTCCCCTTGCTCTTATAATCACAGCAATATTCTCAGCATTATTGTGGAAAGAAACACTTTACTTGGGAAGTGTTGGTGGCACTATTTTACTAGTTGTTGGACTCTATAGTGTCCTGTGGGGGAAGAGCAAGGAGAATGTAAAAGTTGAAAACCTACAACCTCAGCAAACAAAAGAGGAAACAAGATTGGAGTGCATTGTACAGCATTGA 1080 0.4148 MKSFLLGCVAIVEKNKPYVAMCFVQFVYAGMALLSKAAISKGMSPYVFVVYRQAFASVALSPFAFFDSKQSAPLSCNLLCKLFLISLVGLTVSSNLYYVSINYTTATFAAASSNTIPAITFIMALLIRVESISIKRSHGIAKILGSVLSLSGAITFGLVKGPPLSFMKWYQQNQNQTSSTIVHYKVDIIRGPLMMLAANITWSLWLILQGFVVKQYPAKLRLTALQCFFSFMQSTVVAVAVERHNPSAWKLGWDIHLLSVAYCGVVVTGICYWLQVCTIETKGPVFTAMFTPLALIITAIFSALLWKETLYLGSVGGTILLVVGLYSVLWGKSKENVKVENLQPQQTKEETRLECIVQH* 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra1g1581 359 Pfam EamA-like transporter family 18 150 IPR000620 GO:0016020|GO:0016021
Vra1g1581 359 Pfam EamA-like transporter family 190 329 IPR000620 GO:0016020|GO:0016021
Vra1g1581 359 SUPERFAMILY Multidrug resistance efflux transporter EmrE 51 150 - -
Vra1g1581 359 PANTHER WAT1-RELATED PROTEIN 14 336 - -
Vra1g1581 359 SUPERFAMILY Multidrug resistance efflux transporter EmrE 251 334 - -
Vra1g1581 359 PANTHER WAT1-RELATED PROTEIN 14 336 IPR030184 GO:0016021|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra1g1581 Vra-Chr1 26897362 26902237 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra1g1581 16 336 Nodulin-like Gene Family AT2G39510 39.506 1.19e-86 265
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra1g1581 - - gmx:100800562 620.542