Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra1g1569 ATGGAAGGGAATTTGTCTCAGGGAGGTATGGTTCAGGGTGGGAGTTCCTTTGGTGGTTTTGATCTGCCTGGATCAATGAGGGTTCATCGGCAAGGGCATCATCCTCATTCCATGAGTCAACATCAAACTCATCCTTGCCAAGGGCCTTCAGTGCATTCCTCAGTTCATGATGGTTTTCCTCTCACAATGGGAACCTTGCAGAACTGTGATCAAACAATTGCAATGACTGAGTTTAGTCAGGGAGATAGAAACAAGAACTCTCCAAGTGATGAAAGCTTTGCTGAGGAAGGTGTTGATGGTCATCATGAAGGAGGTAGAGGGAAAAAGGGGTCGCCTTGGCAGAGGGTGAAGTGGACTGATAAGATGGTGAGACTTCTGATAACGGCTGTTTCTTACATAGGTGAAGATGCAACATCCGACTGTGGTGGCGCAAGGAGAAAAATTACAGTCCTACAGAAAAAAGGGAAGTGGAAATCAGTTTCCAAGGTCATGGCTGAAAGAGGTTATCGTGTTTCACCTCAGCAGTGTGAGGATAAATTCAATGATCTCAATAAAAGGTACAAAAAGCTTAATGATATGCTAGGCCGGGGAACTTCTTGTCAGGTTGTTGAGAATCCTTCTCTATTGGATGTGATAGATTATCTTTCTGAGAAAGAAAAAGATGAAGTTCGAAAAATATTGAGCTCGAAACACTTGTTCTATGAAGAGATGTGTTCTTACCATAATTGTAACAGGTTGCATTTACCCCATGATCTGGAATTGCAACGATCACTTCAGTTGGCTCATAGAAATAGAGATGATCATGACAGTGATGATGTCAGAAGGTCTCATCACGATGATCACGATGAAGATGATCTAGAAGTGGAAACTGATGATCATGATGATTTTGAGGAGAATTATGCTACTCATGCAGATAGTAGAGGAGTCTATGGGGAAGCGGGGCGACCTATGAAGAGATCGAAACCAGGGCAAGGACATGAAGATGCTGCTACTTTTGGCAGTGCTTTAAACAGCCAAGAGTATAACAAAAGTTCATACCCTCATATGGTTCAATCTGATGTCAATCAAGCTGCACCCGAGAAAATGAGTTCACCATGGTTACAGAAGCAATGGTTTGAATCTCGTTCACTTCAGTTAGAAGAGCAAAAGCTACAAATTCAGGTCGAGATGTTGGAGCTGGAGAAACAAAGATTCAAGTGGCAGAAGTTTAGTAAGAAAAAGGAGCGGGAGTTGGAAAAGTTGAAGCTGGAGAATGAAAGAATGAAGCTTGAGAATGAACGTATTGCTTTAGAACTCAAACGAAAGGGAGCGGGTGCTGACTTTAACTAG 1329 0.4251 MEGNLSQGGMVQGGSSFGGFDLPGSMRVHRQGHHPHSMSQHQTHPCQGPSVHSSVHDGFPLTMGTLQNCDQTIAMTEFSQGDRNKNSPSDESFAEEGVDGHHEGGRGKKGSPWQRVKWTDKMVRLLITAVSYIGEDATSDCGGARRKITVLQKKGKWKSVSKVMAERGYRVSPQQCEDKFNDLNKRYKKLNDMLGRGTSCQVVENPSLLDVIDYLSEKEKDEVRKILSSKHLFYEEMCSYHNCNRLHLPHDLELQRSLQLAHRNRDDHDSDDVRRSHHDDHDEDDLEVETDDHDDFEENYATHADSRGVYGEAGRPMKRSKPGQGHEDAATFGSALNSQEYNKSSYPHMVQSDVNQAAPEKMSSPWLQKQWFESRSLQLEEQKLQIQVEMLELEKQRFKWQKFSKKKERELEKLKLENERMKLENERIALELKRKGAGADFN* 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra1g1569 442 Coils Coil 374 396 - -
Vra1g1569 442 PANTHER F16F4.11 PROTEIN-RELATED 1 442 - -
Vra1g1569 442 MobiDBLite consensus disorder prediction 79 113 - -
Vra1g1569 442 PANTHER FACTOR, PUTATIVE-RELATED 1 442 - -
Vra1g1569 442 MobiDBLite consensus disorder prediction 1 54 - -
Vra1g1569 442 Pfam Myb/SANT-like DNA-binding domain 115 240 IPR044822 -
Vra1g1569 442 Coils Coil 404 433 - -
Vra1g1569 442 MobiDBLite consensus disorder prediction 263 283 - -
Vra1g1569 442 MobiDBLite consensus disorder prediction 88 113 - -
Vra1g1569 442 MobiDBLite consensus disorder prediction 263 330 - -
Vra1g1569 442 Gene3D - 118 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra1g1569 Vra-Chr1 26206104 26208431 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Vra1g1569 Myb_DNA-bind_4 2.9e-24 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra1g1569 - - mtr:MTR_6g035315 647.506