Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra1g1550 ATGTCATCAAATCAAACATCCCTGAACCGAGCCAAGCTTCCAAACAATGACCTTGAGCAACATGCAACAACTCTGGAGATCGAAGCCGAGGACACCTTTGACTACTCGAAAAGATCTCAGTGGCTGCGCGCTGCCGTGTTGGGAGCCAACGATGGTTTGGTCTCGACAGCATCTCTCATGATGGGTATTGGAGCCGTGAAGCAAGACCTGAAGGTCATGATCTTATCAGGGTTTGCAGGGTTGGTGGCAGGGGCTTGCAGCATGGCCATAGGTGAGTTTGTGTCTGTGTACTCACAGCTTGACATAGAGGTTGCCCAGATGAAGAGAGAAAGAGAAAGGATGTCTGGTAGTGACAGAGAAGGAGTAGTAGAAGATACCAATGGAGAAGAGAAAGAGGGTTTGCCAAATCCTTTGCAGGCTGCAGCAGCATCAGCTTTAGCTTTTTCTGTTGGTGCAATGGTGCCATTGCTTGCAGCCTCCTTTATAAGGGAATTTAAGGTGAGGATTGGGGTGGTTGTGGCGGCCGTGACCGTTGCTTTGGCGGTGTTTGGTTGGTTAGGGGCTGTGTTGGGTAAGGCTCCAGTTTTGAGATCTTCTTTGAGGGTCTTGTTTGGGGGTTGGATGGCCATGTTCATCACTTTTGGTCTAACCAAGTTGATTGGTTCAAGTGGACTCTAG 678 0.4926 MSSNQTSLNRAKLPNNDLEQHATTLEIEAEDTFDYSKRSQWLRAAVLGANDGLVSTASLMMGIGAVKQDLKVMILSGFAGLVAGACSMAIGEFVSVYSQLDIEVAQMKRERERMSGSDREGVVEDTNGEEKEGLPNPLQAAAASALAFSVGAMVPLLAASFIREFKVRIGVVVAAVTVALAVFGWLGAVLGKAPVLRSSLRVLFGGWMAMFITFGLTKLIGSSGL* 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra1g1550 225 MobiDBLite consensus disorder prediction 109 131 - -
Vra1g1550 225 MobiDBLite consensus disorder prediction 109 134 - -
Vra1g1550 225 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 11 222 IPR008217 GO:0005384|GO:0030026
Vra1g1550 225 CDD Nodulin-21 40 194 - -
Vra1g1550 225 PANTHER VACUOLAR IRON TRANSPORTER HOMOLOG 1-RELATED 11 222 - -
Vra1g1550 225 Pfam VIT family 130 217 IPR008217 GO:0005384|GO:0030026
Vra1g1550 225 Pfam VIT family 42 118 IPR008217 GO:0005384|GO:0030026
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra1g1550 Vra-Chr1 25711392 25712421 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra1g1550 15 225 Nodulin-like Gene Family AT3G43660 70.142 2.06e-101 290
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra1g1550 K22736 - gmx:100802179 329.717