Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra1g1549 ATGGATGCACAAGCCAAGAAAAAGGCTTTGTTTCGTGCTAAATTGAATGCCCAGAAGAAGGAGAAGCGTATTGAATCTCCCCTTGTGAGGTATAATGAATTTGATCAACCTGTTTGCCGGGTTTGTGATGTTGTTCTAAAGTCCGAGTCTTTATGGGATGCACACCAAGTTTCTCGTAAGCATCGTGAGGCAATAAATAATCTGAAAGCTAATGCAGCTGGATTAACTCAACAAAATAATGCAAAGCCTGTTTCAGATGCCAACATTCCCAAGGCTAAACCAGAACATCCTTTGGGCTCACAATCGAAACTTCCAGAAAGTTCACGAGAAGTGTCTAAACATCAATCTTCGTCAGTGCTTCCACCAGGTTTTTTCGATGACAATGATTCAGGAAAGAAAATTTCTGACCATTTAGCAGACTCTGATTTAGGTAGAAAACCTGCGGTTTCTGCTCAAAATCAGGCGTTAAACTTCAAGAAGGAGAAAGGTCATTTTCATGACAATAGTGCTGCAGAGTCAAATGTTAGCGAGGCCTCAACGGAGAGTAAGCAGACATCAATTAATAGTATTGATACAGAGATCAAGCAAGTAAAAGGGAGTCTGCCTGAAGGATTTTTTGACAATAAGGAAGCTGATTTGCGTGCCCGTGGCATAAAGCTTGTAAAGCCAGATGTCAAAGACGAGTACAAGGAATTTGAGAAGTTGATTCAAGAAGATTTGCAGGAGGTTGACAACAGGTTGGAGGAAGAAGAGATTGATGCGGCCGAAATGATAGAGGAAGCTGAATCTGTAGAGCAGAAGATCTTCAGGGAGAAAGTGGAAATGTTGAAGAAGAGGAGATTGGATCTAAAAGCTGCTAATGCTGCAAAGCGTAATAAATCATCTGAGGTTGTAGCCAAGGAATCTACACACGAAGACTCATCCAGTGATGATGAAAGTGAAGAAAATTTTGCCGTGGATTGGAGAGCACAACACTTGTGA 981 0.4139 MDAQAKKKALFRAKLNAQKKEKRIESPLVRYNEFDQPVCRVCDVVLKSESLWDAHQVSRKHREAINNLKANAAGLTQQNNAKPVSDANIPKAKPEHPLGSQSKLPESSREVSKHQSSSVLPPGFFDDNDSGKKISDHLADSDLGRKPAVSAQNQALNFKKEKGHFHDNSAAESNVSEASTESKQTSINSIDTEIKQVKGSLPEGFFDNKEADLRARGIKLVKPDVKDEYKEFEKLIQEDLQEVDNRLEEEEIDAAEMIEEAESVEQKIFREKVEMLKKRRLDLKAANAAKRNKSSEVVAKESTHEDSSSDDESEENFAVDWRAQHL* 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra1g1549 326 MobiDBLite consensus disorder prediction 129 143 - -
Vra1g1549 326 Pfam Zinc-finger of C2H2 type 39 61 - -
Vra1g1549 326 Gene3D Classic Zinc Finger 32 70 - -
Vra1g1549 326 PANTHER UNCHARACTERIZED 1 326 IPR040050 GO:0003676|GO:0005681|GO:0008270
Vra1g1549 326 MobiDBLite consensus disorder prediction 101 123 - -
Vra1g1549 326 Coils Coil 233 267 - -
Vra1g1549 326 MobiDBLite consensus disorder prediction 286 307 - -
Vra1g1549 326 MobiDBLite consensus disorder prediction 72 146 - -
Vra1g1549 326 MobiDBLite consensus disorder prediction 166 187 - -
Vra1g1549 326 MobiDBLite consensus disorder prediction 169 187 - -
Vra1g1549 326 MobiDBLite consensus disorder prediction 286 326 - -
Vra1g1549 326 Coils Coil 58 78 - -
Vra1g1549 326 SUPERFAMILY beta-beta-alpha zinc fingers 31 71 IPR036236 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra1g1549 1 326 C2H2 Transcription Factor Family AT3G02860 53.153 2.66e-97 288
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra1g1549 K13104 - gmx:100808515 493.041