Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vra1g1549 | ATGGATGCACAAGCCAAGAAAAAGGCTTTGTTTCGTGCTAAATTGAATGCCCAGAAGAAGGAGAAGCGTATTGAATCTCCCCTTGTGAGGTATAATGAATTTGATCAACCTGTTTGCCGGGTTTGTGATGTTGTTCTAAAGTCCGAGTCTTTATGGGATGCACACCAAGTTTCTCGTAAGCATCGTGAGGCAATAAATAATCTGAAAGCTAATGCAGCTGGATTAACTCAACAAAATAATGCAAAGCCTGTTTCAGATGCCAACATTCCCAAGGCTAAACCAGAACATCCTTTGGGCTCACAATCGAAACTTCCAGAAAGTTCACGAGAAGTGTCTAAACATCAATCTTCGTCAGTGCTTCCACCAGGTTTTTTCGATGACAATGATTCAGGAAAGAAAATTTCTGACCATTTAGCAGACTCTGATTTAGGTAGAAAACCTGCGGTTTCTGCTCAAAATCAGGCGTTAAACTTCAAGAAGGAGAAAGGTCATTTTCATGACAATAGTGCTGCAGAGTCAAATGTTAGCGAGGCCTCAACGGAGAGTAAGCAGACATCAATTAATAGTATTGATACAGAGATCAAGCAAGTAAAAGGGAGTCTGCCTGAAGGATTTTTTGACAATAAGGAAGCTGATTTGCGTGCCCGTGGCATAAAGCTTGTAAAGCCAGATGTCAAAGACGAGTACAAGGAATTTGAGAAGTTGATTCAAGAAGATTTGCAGGAGGTTGACAACAGGTTGGAGGAAGAAGAGATTGATGCGGCCGAAATGATAGAGGAAGCTGAATCTGTAGAGCAGAAGATCTTCAGGGAGAAAGTGGAAATGTTGAAGAAGAGGAGATTGGATCTAAAAGCTGCTAATGCTGCAAAGCGTAATAAATCATCTGAGGTTGTAGCCAAGGAATCTACACACGAAGACTCATCCAGTGATGATGAAAGTGAAGAAAATTTTGCCGTGGATTGGAGAGCACAACACTTGTGA | 981 | 0.4139 | MDAQAKKKALFRAKLNAQKKEKRIESPLVRYNEFDQPVCRVCDVVLKSESLWDAHQVSRKHREAINNLKANAAGLTQQNNAKPVSDANIPKAKPEHPLGSQSKLPESSREVSKHQSSSVLPPGFFDDNDSGKKISDHLADSDLGRKPAVSAQNQALNFKKEKGHFHDNSAAESNVSEASTESKQTSINSIDTEIKQVKGSLPEGFFDNKEADLRARGIKLVKPDVKDEYKEFEKLIQEDLQEVDNRLEEEEIDAAEMIEEAESVEQKIFREKVEMLKKRRLDLKAANAAKRNKSSEVVAKESTHEDSSSDDESEENFAVDWRAQHL* | 327 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vra1g1549 | 326 | MobiDBLite | consensus disorder prediction | 129 | 143 | - | - | |
Vra1g1549 | 326 | Pfam | Zinc-finger of C2H2 type | 39 | 61 | - | - | |
Vra1g1549 | 326 | Gene3D | Classic Zinc Finger | 32 | 70 | - | - | |
Vra1g1549 | 326 | PANTHER | UNCHARACTERIZED | 1 | 326 | IPR040050 | GO:0003676|GO:0005681|GO:0008270 | |
Vra1g1549 | 326 | MobiDBLite | consensus disorder prediction | 101 | 123 | - | - | |
Vra1g1549 | 326 | Coils | Coil | 233 | 267 | - | - | |
Vra1g1549 | 326 | MobiDBLite | consensus disorder prediction | 286 | 307 | - | - | |
Vra1g1549 | 326 | MobiDBLite | consensus disorder prediction | 72 | 146 | - | - | |
Vra1g1549 | 326 | MobiDBLite | consensus disorder prediction | 166 | 187 | - | - | |
Vra1g1549 | 326 | MobiDBLite | consensus disorder prediction | 169 | 187 | - | - | |
Vra1g1549 | 326 | MobiDBLite | consensus disorder prediction | 286 | 326 | - | - | |
Vra1g1549 | 326 | Coils | Coil | 58 | 78 | - | - | |
Vra1g1549 | 326 | SUPERFAMILY | beta-beta-alpha zinc fingers | 31 | 71 | IPR036236 | - |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vra1g1549 | 1 | 326 | C2H2 Transcription Factor Family | AT3G02860 | 53.153 | 2.66e-97 | 288 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vra1g1549 | K13104 | - | gmx:100808515 | 493.041 |