Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra1g1544 ATGGAGCTGATCAATTTGCTGCTCTCACTGATCCTTTCAGTGTTGGTGTTATCAGTGCTGTTCTTGTTGTATCAAACTCGTTCTCCTAAAGCAATGGAAGGCATCCCTGGAAGCCTTGGTTGGCCTATTGTGGGAGAGAGCTTCTCATTCCTCTCTGACTTTTCAAGTCCCTCTGGGATCTTTAGCTTCATGATCAAGAGGCAAAAGAGATATGGAATGGTTTTCAAGAGCTTTGTCTTGGGGAGGTTTACTATCTTCATGACAGGGAGGGAAGCAAGTAAGATATTGTTAACTGGCAAGGATGGTATTGTGAGTTTGAATCTGTTTTACACTGGCCAGCAAGTTCTGGGCCCCACCAGCTTGCTGCAAACCACAGGGGACGCTCACAAAAGGCTAAGAAGGCTGATTGGTGAACCTTTATCAATTGATGGACTGAAGAAATATTTCCATTTTATCAACACTCAGGCAATGCAGACATTAGATCAATGGGAAGGAAGGAAAGTCCTTGTTCTTGAAGAGGCTTCTACATTTACTTTAAAAGTGATTGGACATATGATCATGAGTTTAGAGCCTTCTGGGGAGGAGCAAGAAAAGTTTAGATCAAATTTTAAGATTATTTCTTCCTCATTTGCATCATTGCCATTTAAACTTCCAGGGACAGCTTTTCATCGTGGCATCAAGGCTCGAGATAGGATGTATGAGATGTTGGATTCTACAATTTTGAGGAGGAGAAGTGGCCAAGACTTTCAACAGGATTTCTTAGGATCCTTAGTTATGAAACACAGCAAAGAAGATGGAGAAGAAGATGAAAATAAACTCACAGATAAACAATTGAAGGATAATATATTAACTCTGCTGGTTGCAGGCCATGATACCACAACTGCTGCTCTTACTTGGCTCATTAAATTTCTTGCTGAGAATCCGATTGTTTTGGAAAAATTGAGAGAGGAACATAGACAAATTGTGGCCGAAAGAAAGATTGGAACAGATCTTACCTGGGCAGAAGCTAATAACATGCCTTACACATTCAAAGTCATCAGTGAAACTCTTCGAAGAGCCACAATACTACCTTGGTTTTCAAGAAAAGCATCCCAGGATTTTGAAATTGAAGGTTATAAAATTAAGAAAGGTTGGTCTGTCAACCTAGATGTTGTTTCCATACACCATGACCCAGAAGTTTTCCCTGATCCTGAAAAGTTTGATCCCTCAAGATTCGATGAACCCGTGAGGCCTTTCAGTTTTCTTGGATTTGGTAGTGGACCACGCATGTGTCCTGGAATGAACCTTGCCAAGCTTGAAATTTGTGTCTTCATCCATCACCTTGTCAACAGATACAAGTGGAGACCTCTGGAGAATGAGAATTCTGTCCAACCAACGCTTGTAAGGATGCCAAAGAACAAATATCCTATTATGGTTGAGTCACTGTAA 1428 0.4097 MELINLLLSLILSVLVLSVLFLLYQTRSPKAMEGIPGSLGWPIVGESFSFLSDFSSPSGIFSFMIKRQKRYGMVFKSFVLGRFTIFMTGREASKILLTGKDGIVSLNLFYTGQQVLGPTSLLQTTGDAHKRLRRLIGEPLSIDGLKKYFHFINTQAMQTLDQWEGRKVLVLEEASTFTLKVIGHMIMSLEPSGEEQEKFRSNFKIISSSFASLPFKLPGTAFHRGIKARDRMYEMLDSTILRRRSGQDFQQDFLGSLVMKHSKEDGEEDENKLTDKQLKDNILTLLVAGHDTTTAALTWLIKFLAENPIVLEKLREEHRQIVAERKIGTDLTWAEANNMPYTFKVISETLRRATILPWFSRKASQDFEIEGYKIKKGWSVNLDVVSIHHDPEVFPDPEKFDPSRFDEPVRPFSFLGFGSGPRMCPGMNLAKLEICVFIHHLVNRYKWRPLENENSVQPTLVRMPKNKYPIMVESL* 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra1g1544 475 PANTHER CYTOCHROME P450 FAMILY 722 SUBFAMILY A POLYPEPTIDE 1 10 436 - -
Vra1g1544 475 PANTHER CYTOCHROME P450 26 10 436 - -
Vra1g1544 475 Pfam Cytochrome P450 36 465 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra1g1544 475 SUPERFAMILY Cytochrome P450 30 473 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra1g1544 475 PRINTS E-class P450 group I signature 68 87 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra1g1544 475 PRINTS E-class P450 group I signature 277 294 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra1g1544 475 PRINTS E-class P450 group I signature 297 323 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra1g1544 475 PRINTS E-class P450 group I signature 343 361 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra1g1544 475 PRINTS E-class P450 group I signature 383 407 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra1g1544 475 PRINTS E-class P450 group I signature 414 424 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra1g1544 475 PRINTS E-class P450 group I signature 424 447 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra1g1544 475 Gene3D Cytochrome P450 25 475 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra1g1544 475 PRINTS P450 superfamily signature 288 305 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra1g1544 475 PRINTS P450 superfamily signature 344 355 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra1g1544 475 PRINTS P450 superfamily signature 415 424 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra1g1544 475 PRINTS P450 superfamily signature 424 435 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra1g1544 475 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 417 426 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra1g1544 Vra-Chr1 25609039 25611622 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra1g1544 1 455 Cytochrome P450 AT5G45340 37.093 2.02e-102 311
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra1g1544 - - gmx:100810666 868.996