Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra1g1520 ATGTCTGTTTCCATTTTCTTCTTCACACTCCTACCTTTACTATTCCCCTCTTCTCATTGCACCACCATCATAGTTGATGGATCTTCAGAGTGGAAGAACCCCACTGTTCACGTTGGAGATTCCATCATTTTCAATCACAAGCAACACTACAACATCTACATTTTCAAGAACCGCAATGCCTTTGATCTCTGCAATTTCGCACAAGCTACTCTTCTCACCAATCCCAACACTGCCTCCTACACATGGCATCCATCACGACCTGGTTTCTTCTACTTTAGCTTCAATGGTGGGTCTCTCATAGCATGCCAAGCTTCTCAGAAGCTAGCCATTGAGGTGACCTCAGCAGTAGTAGCAGCCACACCTCCATTTTCTGGTGAAGTGTCACCATCTCCTTTCTTTCCATGGCATTTTAATACTCTACAAGAGGGTTCACCTGGTCCTTCACCTTCATCAAGTGTGGCAACAGCTCCATTGGAACCGTATAAAAGTGGCAGCGTGCCCTTCATCAGCAGTAACCCTGCAGTGCCTCTTCCCACTGATGAAGTTGACTCTGCTACTTTACACCCTCTTCCCACCTCTAGTAGCCATCAACAACAGGTGATGATTGGATCATTTGGATTTGTAGTAGCTGTGCACACAATTACTTCACTAGTGCTATAA 660 0.453 MSVSIFFFTLLPLLFPSSHCTTIIVDGSSEWKNPTVHVGDSIIFNHKQHYNIYIFKNRNAFDLCNFAQATLLTNPNTASYTWHPSRPGFFYFSFNGGSLIACQASQKLAIEVTSAVVAATPPFSGEVSPSPFFPWHFNTLQEGSPGPSPSSSVATAPLEPYKSGSVPFISSNPAVPLPTDEVDSATLHPLPTSSSHQQQVMIGSFGFVVAVHTITSLVL* 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra1g1520 219 PANTHER OS04G0422700 PROTEIN 2 217 - -
Vra1g1520 219 Gene3D - 19 115 IPR008972 -
Vra1g1520 219 SUPERFAMILY Cupredoxins 20 113 IPR008972 -
Vra1g1520 219 PANTHER OS04G0422700 PROTEIN 2 217 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra1g1520 Vra-Chr1 24614410 24617209 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra1g1520 - - vra:106767018 429.869
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra1g1520 1 24614410 24617209 Vra8g2142 8 39710783 39713310 PCT