Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra1g1482 ATGGCTAAGTCCAGTTGTTGCAGTTGTTTAAATTCTCTGTTCTTGATTTGTTCGATTCTATTTAGTTCCTACATGATTTGCTGTGAAGCAGAAGGCAATCCCGCAGTAGTGAATGGATTATCATATTCCTTCTATTCCGAAAGCTGTCCCAACCTTGAAACCATTGTGACAAACCATCTCAGAAAGGTGTTCAACCAAACTCATTGGCAAGCTCCAGCCTTACTCGTCATTTTCTTCCATGATTGTTTTGTTCAGGGATGTGATGGATCTTTGCTACTGGATGGTAATCCAGGTGAAAGGGATCATCCACTGAATAGAGGCATAAGCTCTAAGGCTCTGCAGACCATTGATGAACTAAGAGAAGTTGTTCACAACCACTGTGGAAGGATAGTTTCATGTGCAGATATCACTGTCTTGGCAGCTCGTGATGTTATTTTTCTTTCTGGAGGTCCCTATTTCAATGTGCCACTTGGAAGACGAGACAGTCTAAACTTTAACATTGAAGAAACAAACAATCTTCCATTACCCTACAACATCACCGATGTCACACTGAAAACATTTGAATCCAAAAACTTGGATGTTATAGATGTGGTTGCCTTATCAGGTGTACACACCATTGGTCGTGCCCATTGTCATACATTCTACAACAGGCTTTCTCCTCAAGATCCCACCATGGACAAAACCTTAGCTAAAATCCTTAATTCTACTTGCCCTACCACATACTCACGTAACACTTTTCCTTTGGACTTCAGAACCCCCAAAACCTTCGATAACAAATACTACATTAACTTGATGAATCACCAAGGTTTGTTCACTTCCGACCAAGACTTGTTCAAAGACAAGAGGACAAAAGGGTTGGTAGAAGCCTTTGCACTTAATCAAACCTTCTTCTTCCACAAATTCATTCATGCTTTTATAAAGATGAGCCAATTGGATGTGTTGACTCGAAATCAAGGTGAAATTCGTGCCAAATGTAATCTCATAAATGATGAGAGTTCTACAGTGAAGTCTATTGTGGATGAGATTGTACAATTACCCAATTGA 1044 0.3994 MAKSSCCSCLNSLFLICSILFSSYMICCEAEGNPAVVNGLSYSFYSESCPNLETIVTNHLRKVFNQTHWQAPALLVIFFHDCFVQGCDGSLLLDGNPGERDHPLNRGISSKALQTIDELREVVHNHCGRIVSCADITVLAARDVIFLSGGPYFNVPLGRRDSLNFNIEETNNLPLPYNITDVTLKTFESKNLDVIDVVALSGVHTIGRAHCHTFYNRLSPQDPTMDKTLAKILNSTCPTTYSRNTFPLDFRTPKTFDNKYYINLMNHQGLFTSDQDLFKDKRTKGLVEAFALNQTFFFHKFIHAFIKMSQLDVLTRNQGEIRAKCNLINDESSTVKSIVDEIVQLPN* 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra1g1482 347 Gene3D Peroxidase, domain 2 175 309 - -
Vra1g1482 347 SUPERFAMILY Heme-dependent peroxidases 36 330 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vra1g1482 347 Pfam Peroxidase 57 291 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vra1g1482 347 CDD secretory_peroxidase 39 328 IPR033905 GO:0004601|GO:0042744
Vra1g1482 347 PRINTS Plant peroxidase signature 49 68 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra1g1482 347 PRINTS Plant peroxidase signature 73 93 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra1g1482 347 PRINTS Plant peroxidase signature 111 124 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra1g1482 347 PRINTS Plant peroxidase signature 130 140 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra1g1482 347 PRINTS Plant peroxidase signature 149 164 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra1g1482 347 PRINTS Plant peroxidase signature 195 207 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra1g1482 347 PRINTS Plant peroxidase signature 247 262 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra1g1482 347 PRINTS Plant peroxidase signature 263 280 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra1g1482 347 PRINTS Plant peroxidase signature 303 316 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra1g1482 347 PANTHER PEROXIDASE 16 333 - -
Vra1g1482 347 Gene3D - 44 326 - -
Vra1g1482 347 PRINTS Haem peroxidase superfamily signature 71 85 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vra1g1482 347 PRINTS Haem peroxidase superfamily signature 131 148 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vra1g1482 347 PRINTS Haem peroxidase superfamily signature 149 161 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vra1g1482 347 PRINTS Haem peroxidase superfamily signature 196 211 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vra1g1482 347 PRINTS Haem peroxidase superfamily signature 249 264 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vra1g1482 347 PANTHER PEROXIDASE 25-RELATED 16 333 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra1g1482 347 ProSitePatterns Peroxidases proximal heme-ligand signature. 196 206 IPR019793 -
Vra1g1482 347 ProSiteProfiles Plant heme peroxidase family profile. 39 329 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra1g1482 Vra-Chr1 23041389 23044058 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra1g1482 36 345 Peroxidase AT1G71695 50.943 4.27e-109 321
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra1g1482 K00430 - gmx:100816373 524.242