Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra1g1479 ATGTTTGTATCATGGATATTGAAGCGTGAAAGAAATATTGTGACCAAAATGGAGTCACTCCAAACTGCTCTTTCTCCTCTCACAGTTGCACTTCTGGTTCTAATCCTGTCATTTCTCTACCTCTTCCTTGTGCTCCACCGCACCAGAATCAAAGAACCACCCACAATTCCCGGCGCATGGCCGATTATCGGCCACCTCCCCCTGCTAGCGCGGTCCCCCGCCACCCACTACCTCCTGGGCACGTTGGCGGACCGCCATGGCCCCATCTTCAGCATCAATATAGGCACAGTGAAAACCGTAGTCATCAGCAATTGGGAAATGGCGAAAGAGTGCTTCACCACAAACGACGTCGCTGTGTCCTACCGCCCCTACCTTGTGGCCTGCCAAAACATGACCTACAACCTCGCCATGCTAGGATTCGCACCCTACGGACAATTTTGGCGTGACATGAGGAAGAACGTTGCGTTCGTGTTCCTCGCAGACCACCGCATCGACGCGCTCTCACACGTGCGCATCTCCGAGGTGAGAACCTCGGCGAAAGAGCTTTACCACAAGTGGAAACGCGGGAAAACGGAGAAGGACTTTTTTATGGTGGACATGACGCAGTGGCTGAAGGAAGTTGCTTTCAACGTGGTGCTGAGGATGGTTGCCGGGAAGAGGTACTTCGGAGAAAAAGCGGTGGTTGAGGAGGAAGAAGCGCGAATATGTTTGGCGACATTCAAAGAATACATGCGGCTGTTTGGGGTTTTCACGATAGGGGACGCGGTGCCGTGGCTGAGGCGGTTCGATTTCGGAGGGCATGAGAAGGCCATGAAAGAGAATTTCAAGCATTTGGATGCTATGGTTGGGCAATGGTTGGAAGAACACAAAAGGAAAAGGAAATTGAACAGTGAGAAAGGTGAGAAAGGGGAAGATTTTATGGAGTCAATGCTGTCGGAGTTCGATGGAACCAACATTCATGGGTTTGATTCTGATACTATCATCAAAGCCACGGCAATGGCATTGATTTTGGGAGGAACAGACACAAGCTCCGCTAGTAACATCTGGACTCTGTCTTTGCTACTGAACAATCCTGGAGCATTGAATAAAGTAATGGAAGAAATTGACACTCACATTGGGAAAGAGAGACTTGTGACTGAGTCAGATACGAACAAGTTGGTGTACCTTCATGCAGTTGTTAAGGAGTCACTAAGGCTATATCCACCCACTCCTCTTAATGCTCCTNGTGAATTCAGAGAAGATTGCAAGCTTGGAGAATANCATGTGAAGAAAGGAACTCGTCTGATCACAAACTTGTGGAAGATCCAAACAGACCCTAAGATTTGGCCAGAGCCTTNGGAGTTCAAGCCTGAAAGGTTCCTCACCACACACAAAGATGTAGATGTAAAGGGAAAACACTTTGAGCTCATCCCTTTTGGAAGTGGTAGGAGGATATGCCCTGGAGTGACCTTTGGCCTTAAAACTTCTTNTTTAACTTTGGNAAANTTTCTTCACTGCTTTCATGTCTCTAAATCCTCAACTGAACCTATAGATATGACTTCAGCTGTGGAATTGACCAATGTTAAGGTTACTCCCCTTCAACTTCTCATCAAACCTCGTTTGGCTCCTAGTCTTTATGAAAACATGTAA 1629 0.4733 MFVSWILKRERNIVTKMESLQTALSPLTVALLVLILSFLYLFLVLHRTRIKEPPTIPGAWPIIGHLPLLARSPATHYLLGTLADRHGPIFSINIGTVKTVVISNWEMAKECFTTNDVAVSYRPYLVACQNMTYNLAMLGFAPYGQFWRDMRKNVAFVFLADHRIDALSHVRISEVRTSAKELYHKWKRGKTEKDFFMVDMTQWLKEVAFNVVLRMVAGKRYFGEKAVVEEEEARICLATFKEYMRLFGVFTIGDAVPWLRRFDFGGHEKAMKENFKHLDAMVGQWLEEHKRKRKLNSEKGEKGEDFMESMLSEFDGTNIHGFDSDTIIKATAMALILGGTDTSSASNIWTLSLLLNNPGALNKVMEEIDTHIGKERLVTESDTNKLVYLHAVVKESLRLYPPTPLNAPXEFREDCKLGEXHVKKGTRLITNLWKIQTDPKIWPEPXEFKPERFLTTHKDVDVKGKHFELIPFGSGRRICPGVTFGLKTSXLTLXXFLHCFHVSKSSTEPIDMTSAVELTNVKVTPLQLLIKPRLAPSLYENM* 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra1g1479 542 PRINTS E-class P450 group I signature 83 102 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra1g1479 542 PRINTS E-class P450 group I signature 207 225 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra1g1479 542 PRINTS E-class P450 group I signature 327 344 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra1g1479 542 PRINTS E-class P450 group I signature 347 373 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra1g1479 542 PRINTS E-class P450 group I signature 390 408 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra1g1479 542 PRINTS E-class P450 group I signature 431 455 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra1g1479 542 PRINTS E-class P450 group I signature 469 479 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra1g1479 542 PRINTS E-class P450 group I signature 479 502 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra1g1479 542 PANTHER CYTOCHROME P450 82C3-RELATED 25 541 - -
Vra1g1479 542 Pfam Cytochrome P450 54 514 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra1g1479 542 PANTHER CYTOCHROME P450 FAMILY PROTEIN 25 541 - -
Vra1g1479 542 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 472 481 IPR017972 GO:0005506|GO:0016705
Vra1g1479 542 Gene3D Cytochrome P450 47 537 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra1g1479 542 SUPERFAMILY Cytochrome P450 54 533 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra1g1479 542 PRINTS P450 superfamily signature 338 355 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra1g1479 542 PRINTS P450 superfamily signature 391 402 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra1g1479 542 PRINTS P450 superfamily signature 470 479 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra1g1479 Vra-Chr1 22966621 22968420 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra1g1479 20 539 Cytochrome P450 AT4G31940 44.697 3.75e-160 464
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra1g1479 - - gmx:100802193 778.089