Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vra1g1472 | ATGGATTTTACTGCGGAGAAGAAGGAATCAGAGAACAACAGCGCTAATAACCCCGAAAACGCTCATCAAACGTTAGATTCTTCTTCTCCTCAATTGGCGTCGGCACTTGATTCAAGCAGCAAAGAAACCGAAGAACGACAATCTCGTGAACTCAAAGCTGGTCTTCACCCTCTGAAGAACAAATTTGTTTTCTGGTACACTCGTCGAACACCTGGAGTTCGAAACCAGACCTCATACGAGGACAACATAAAGAAAATTGTTGAATTTAGTACGGTTGAAGGATTTTGGGTCTGCTATTGCCATCTTGCCCGGCCTGCTTCTTTGCCTAGTCCCACAGATTTGCACCTTTTCAAGGAAGGAATTCGCCCTTTATGGGAGGACTCTGCTAACTGCAATGGTGGTAAATGGATTATACGATTCAAAAAGGTTGTCTCGGGTCGGTTTTGGGAGGACCTGGTTCTTGCCTTAGTGGGTGACCAATTGGATTATGGGGATAACATATGCGGTGCAGTACTAAGCATTCGTTTCAATGAGGATATATTGAGTGTCTGGAATCGCAATGCTTCAGACCATCAGGCTGTAATGGCCCTGAGAGATTCAATCAAACGTCACTTGAAGCTTCCTCACAGCTATGTTATGGAGTACAAACCCCATGACGCCTCTCTGCGAGACAATTCATCCTACAGGAACACTTGGTTGAGAGGGTAG | 708 | 0.452 | MDFTAEKKESENNSANNPENAHQTLDSSSPQLASALDSSSKETEERQSRELKAGLHPLKNKFVFWYTRRTPGVRNQTSYEDNIKKIVEFSTVEGFWVCYCHLARPASLPSPTDLHLFKEGIRPLWEDSANCNGGKWIIRFKKVVSGRFWEDLVLALVGDQLDYGDNICGAVLSIRFNEDILSVWNRNASDHQAVMALRDSIKRHLKLPHSYVMEYKPHDASLRDNSSYRNTWLRG* | 236 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vra1g1472 | 235 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED | 40 | 235 | IPR001040 | GO:0003723|GO:0003743|GO:0006413 | |
Vra1g1472 | 235 | MobiDBLite | consensus disorder prediction | 1 | 51 | - | - | |
Vra1g1472 | 235 | ProSitePatterns | Eukaryotic initiation factor 4E signature. | 113 | 136 | IPR019770 | GO:0003723|GO:0003743|GO:0005737|GO:0006413 | |
Vra1g1472 | 235 | Pfam | Eukaryotic initiation factor 4E | 57 | 215 | IPR001040 | GO:0003723|GO:0003743|GO:0006413 | |
Vra1g1472 | 235 | SUPERFAMILY | eIF4e-like | 43 | 231 | IPR023398 | - | |
Vra1g1472 | 235 | Gene3D | RNA Cap, Translation Initiation Factor Eif4e | 29 | 228 | IPR023398 | - | |
Vra1g1472 | 235 | PANTHER | BNAA10G16710D PROTEIN | 40 | 235 | - | - | |
Vra1g1472 | 235 | MobiDBLite | consensus disorder prediction | 14 | 38 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vra1g1472 | Vra-Chr1 | 22753639 | 22756569 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vra1g1472 | 43 | 235 | Eukaryotic Initiation Factors Gene Family | AT5G18110 | 86.528 | 1.99e-127 | 357 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vra1g1472 | K03259 | - | gmx:100499744 | 441.039 |