Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vra1g1440 | ATGGGCAGGTATTACCACCTTTCTTCATCTTTCCTTAGTGTTCTTTACTTCCTCTTTTCTTTCTCTCCCATGGTCTTCTCTCTGCTATCACAAACCCAAACACAAACTATGAACAGTCTCTCAAAGAATCTTACTGGTAGGATTCCATGGACTGGCTCTGACCCATGTGCATGGAAGGGAGTGAGTTGTGACCGTGCCAACTCCTCTGTAGTAGGGATTTCTTTATCTGGCTTTTCACTCAATTCTTCTGACTTTCTGCCCCTTGTTTGCAAAATTGAAACTTTAGAGCTTCTTGATGTCTCCAATAACTATCTGAGCTCAATCCATGATGGTTTCATCACTGAGTGTGGAAAGATAAAGGGTTTGAAGCTGTTGAATTTTAGTAATAACAATTTAGGTATTTTACCTACTTTTCATGGCTTTGATGCATTGGAATCCCTGGATATGTCTTTCAATGCAATGAGAGGGAATATTGTTTTAGAGATAGATGAGTTGGTTAGCCTCAAAATTTTGAATCTTACTTTCAATGGATTCTCTGGGTCTCTTCCTACCAAATTGGGAAAGTCCATGGTTTTGGAGCACCTTCTGCTTTCTAACAATAGTTTTGAAGGCAAAATCCCTGATGAATTATTCAGTTATGAAAACTTGACTTGGATTGATCTTAAGAACAATATACTTTCACACTCTATTCCTACCAATATTGGGAAGCTTTCTAAATTAGAAACTTTGATCCTTTCCACTAATAACCTCACTGGTGAAATTCCAACTTCACTGGCGAACATCACCAAACTTTCAAGATTTGCAGCAAATCAGAACAGCTTCACAGGTTCTATACCTTCTGGGATTACAAAATATCTCACGAGTTTGGATCTTAGTTATAATGCTCTGTCTGGCGCCATTCCAGAAGACTTTTTATCTCCACAACAGTTGCAGGTTGTAGATTTGACCAATAATATGTTAAATGGGTCTTTACCTACGAAAGTTTCTCCAAATTTGTTCAGGTTGAGGTTTGGGAGCAATCAGCTGAGTGGAAACATTCCCTCAGATGCTTTTGTAGAAGTTCAGAATTTGACATACTTGGAGCTGGATAACAATATCTTCACGGGATCAATACCACCTAAGTTGGGTTCTTGCAGGAATTTGACATTGTTGAATTTAGCTCAGAATCGGTTGAGTGGTATATTGCCACAAGAGATTGCCAATCTTACCAATCTCCATGTCTTGCAGCTCCAATTGAACAATCTTAGTGGTTCAATCCCAACTCAAATCGGCCAACTTCATGAGTTGTTAACCCTGAATTTGAGCCGGAATTCTCTGACTGGAACAATTCCATCTGAGATTACAAGTTTAAGTCGTCTTAATTTCCTGTACTTGCAAGGGAACTATCTTAGTGGTTCCATACCGGCATCTATTGGCAAGTTTAATCATCTTTTAGAACTCCAACTTGGGGAAAACCACTTGAGCGGTGTGATTCCAAGTATGCCATTGAGTCTGCAGGTTACATTGAATCTTAGTAGCAACCACTTTAACGGTTCTATTCCTAGCAGTTTTGGGATTTTGAGTAGCCTAGAAATCTTGGATCTCTCAAATAACAACTTTTCTGGTACAATTCCTCATGATCTTACTAACATGCCGGCTTTGACACGGTTGATACTTTCTAACAATCCTCTGTCTGGAGAAATCCCAAAATTCAATCACTATGTTAATGTTGAACATAATGGAACTAACCTAAAAGATAATACTGCAGAGGACAACACCACTACCAAGACAGCAGGGTCCAAGAATGTAATAAGCGTTGGAGTGGCCATTCTCATTGCAATTGTAGCAGCTATTTTTCTTGTTGGCTTTGTCACTCTGTTGGTTTTGTCAGTGTCACGCCACTATTACAGGGTCAATGATGAGCATTCACAGTCAACAGAAGTTCGTCAGCATCCTCAGGTCATGCAAAGTAGTCTGTTAACTCCTAATGGAATACATAGATCAAACATTGACTTCTCCAAAGCCATGGAAGCTGTTGCCGAAACATCAAATGTTACTCTTAAAACAAGGTTTTCAACTTATTATAAGGCTGTTATGCCGTCTGGTTCAATCTATTATGTCAAGAAACTGAACTGGTTTGACAAGGTATTCCAAGTAGGAAGTCATGATAAGTTTGTTAAAGAGCTAGAAGTATTGGCCAAATTGAACAATTCGAATGTCATGACTCCTTTGGCCTATGTTCTGTCCACTGACACTGCTTATATACTATACGAGTTTATCTCAAATGGCTCCCTCTTTGATGTTCTTCATGGAAGCATGGATTTGACATTAGATTGGGCTAGCAGATACAGTATAGCTGTTGGAGTGGCTCAAGGACTTTCTTTTCTTCATGGATTCGCCTCTAGTCCAATACTACTCCTTGACCTGTCAAGTAAAAGTATTATGCTGAAGTCCCTCAAGGAGCCTCTAGTTGGGGATATTGAACACTACAAGGTGATTGATCCCTCAAAAAGTACAGGGAACTTTTCTGCAGTTGCTGGTTCAGTTGGTTATATTCCTCCAGAGTATGCATACACAATGACAGTAACAATGGCTGGGAATGTCTACAGCTTTGGTGTGATTCTGCTTGAACTCCTGACAGGAAAGCCTGCAGTGACTGAGGGAACGGAATTGGTGAAGTGGGTTATGCGTAACTCCACAAACCAAGATTACATTCTTGACTTTAATGTCAGTAGAACATCACAAGCAGTCAGAAACCAGATGCTTGCAATTCTTGAGATTGCTCGTGTTTGTGTTGGAACATCCCCAGAATCAAGACCAAAGATGAAGAGTGTGCTAAGGATGCTCTTAAATGCTAGATGA | 2841 | 0.3981 | MGRYYHLSSSFLSVLYFLFSFSPMVFSLLSQTQTQTMNSLSKNLTGRIPWTGSDPCAWKGVSCDRANSSVVGISLSGFSLNSSDFLPLVCKIETLELLDVSNNYLSSIHDGFITECGKIKGLKLLNFSNNNLGILPTFHGFDALESLDMSFNAMRGNIVLEIDELVSLKILNLTFNGFSGSLPTKLGKSMVLEHLLLSNNSFEGKIPDELFSYENLTWIDLKNNILSHSIPTNIGKLSKLETLILSTNNLTGEIPTSLANITKLSRFAANQNSFTGSIPSGITKYLTSLDLSYNALSGAIPEDFLSPQQLQVVDLTNNMLNGSLPTKVSPNLFRLRFGSNQLSGNIPSDAFVEVQNLTYLELDNNIFTGSIPPKLGSCRNLTLLNLAQNRLSGILPQEIANLTNLHVLQLQLNNLSGSIPTQIGQLHELLTLNLSRNSLTGTIPSEITSLSRLNFLYLQGNYLSGSIPASIGKFNHLLELQLGENHLSGVIPSMPLSLQVTLNLSSNHFNGSIPSSFGILSSLEILDLSNNNFSGTIPHDLTNMPALTRLILSNNPLSGEIPKFNHYVNVEHNGTNLKDNTAEDNTTTKTAGSKNVISVGVAILIAIVAAIFLVGFVTLLVLSVSRHYYRVNDEHSQSTEVRQHPQVMQSSLLTPNGIHRSNIDFSKAMEAVAETSNVTLKTRFSTYYKAVMPSGSIYYVKKLNWFDKVFQVGSHDKFVKELEVLAKLNNSNVMTPLAYVLSTDTAYILYEFISNGSLFDVLHGSMDLTLDWASRYSIAVGVAQGLSFLHGFASSPILLLDLSSKSIMLKSLKEPLVGDIEHYKVIDPSKSTGNFSAVAGSVGYIPPEYAYTMTVTMAGNVYSFGVILLELLTGKPAVTEGTELVKWVMRNSTNQDYILDFNVSRTSQAVRNQMLAILEIARVCVGTSPESRPKMKSVLRMLLNAR* | 947 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vra1g1440 | 946 | Pfam | Leucine rich repeat | 94 | 153 | IPR001611 | GO:0005515 | |
Vra1g1440 | 946 | Pfam | Leucine rich repeat | 403 | 463 | IPR001611 | GO:0005515 | |
Vra1g1440 | 946 | Pfam | Leucine rich repeat | 501 | 557 | IPR001611 | GO:0005515 | |
Vra1g1440 | 946 | PANTHER | LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED | 13 | 943 | - | - | |
Vra1g1440 | 946 | Gene3D | Ribonuclease Inhibitor | 284 | 497 | IPR032675 | - | |
Vra1g1440 | 946 | SMART | LRR_typ_2 | 92 | 115 | IPR003591 | - | |
Vra1g1440 | 946 | SMART | LRR_typ_2 | 119 | 140 | IPR003591 | - | |
Vra1g1440 | 946 | SMART | LRR_typ_2 | 165 | 189 | IPR003591 | - | |
Vra1g1440 | 946 | SMART | LRR_typ_2 | 450 | 474 | IPR003591 | - | |
Vra1g1440 | 946 | SMART | LRR_typ_2 | 402 | 426 | IPR003591 | - | |
Vra1g1440 | 946 | SMART | LRR_typ_2 | 379 | 401 | IPR003591 | - | |
Vra1g1440 | 946 | SMART | LRR_typ_2 | 354 | 378 | IPR003591 | - | |
Vra1g1440 | 946 | SMART | LRR_typ_2 | 520 | 544 | IPR003591 | - | |
Vra1g1440 | 946 | SMART | LRR_typ_2 | 237 | 260 | IPR003591 | - | |
Vra1g1440 | 946 | SUPERFAMILY | Protein kinase-like (PK-like) | 684 | 942 | IPR011009 | - | |
Vra1g1440 | 946 | PANTHER | F12K21.25 | 13 | 943 | - | - | |
Vra1g1440 | 946 | Gene3D | Ribonuclease Inhibitor | 498 | 590 | IPR032675 | - | |
Vra1g1440 | 946 | Gene3D | Transferase(Phosphotransferase) domain 1 | 753 | 946 | - | - | |
Vra1g1440 | 946 | SUPERFAMILY | RNI-like | 253 | 563 | - | - | |
Vra1g1440 | 946 | PRINTS | Leucine-rich repeat signature | 286 | 299 | - | - | |
Vra1g1440 | 946 | PRINTS | Leucine-rich repeat signature | 520 | 533 | - | - | |
Vra1g1440 | 946 | Gene3D | Ribonuclease Inhibitor | 187 | 283 | IPR032675 | - | |
Vra1g1440 | 946 | Gene3D | Ribonuclease Inhibitor | 27 | 186 | IPR032675 | - | |
Vra1g1440 | 946 | Gene3D | Phosphorylase Kinase; domain 1 | 634 | 752 | - | - | |
Vra1g1440 | 946 | SUPERFAMILY | L domain-like | 48 | 325 | - | - | |
Vra1g1440 | 946 | ProSiteProfiles | Protein kinase domain profile. | 673 | 946 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vra1g1440 | 946 | Pfam | Protein kinase domain | 684 | 940 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vra1g1440 | Vra-Chr1 | 22006371 | 22010697 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vra1g1440 | 144 | 946 | Receptor kinase-like Gene Family | AT2G41820 | 38.462 | 1.01e-156 | 482 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-XI-1 | Vra1g1440 | Pkinase | 2.9e-22 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vra1g1440 | - | - | gmx:100796647 | 1355.12 |