Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra1g1429 ATGAAAAGAAAATTGGAAACAAAATCATTGGCGTTTGATATAAATGAAACGGAACCTATAATATGCTATGCAGCCACCATGATATCATCAGACGGGCTTTGGCATAAGGAAAACCCTTTGTACTATTCTCTGCCTCTCTTTCTCGTGCAATTACTGTTAGTTCTCGTTATCACCCGTCTATTTGTGTACATACTCAAGCCCATTCGCCAGCCACGCGTTATTTCTGAACTCATGGGAGGCCTAATATTAGGTCCTTCGGTGCTTGGGAAAAACAAAGCATTTAGAGATGCAGTTTTTCCGCAAAGAGGTGAGATCTTGCTTGAAGCAATGGCAAGTGTTGGCATTGTATATTTTATGTTCTTGGTGGGAGTGGGGATGGATGCAACATCGTTAAGACGCATAGGTAGAAAAGCAGTGGTCATAGCACTTCTAGGCATGGTCCTCCCTTTCGCAATTGGAGCTCTCTTCACTATGTATTTGATCAAATTCGACGATATATCAGCAAAAAACACCGCTAACGTCCTATTCATTGGTTCAATTCTTTCTGTGGCAGCGTTTCCCGTTCTTGTGAGAATCCTTGCAGAGCTGAAATTCATCAACTCTGAGTTGGGAAGGATTGCTCTTTCATCTGCACTCGTCAATGATCTGATTTCAAGTCTGCTCTTGATTCTTTCTGTTAATTTGGCACAACGTAATAAGCCTTCTATCACTCTGCTGTCGACTTTCTTGTCAAGTATAGGGTTTATTGCTTTTAATATTTTTGTGGTGAGACCTGGGGTGTTGTGGATGGTAAGGAAAACCCCTGAGGGAGAAACATTCAGTGATTTCTATATGTGCATAATATTAGCAGGTGTGATGCTCTCAGGTTTGATCACAGATATTATTGGAACCCATGCAGTTTTTGGAGCCTTTGTGTTTGGTTTGACAATCCCAAATGGACCTCTAGGGCTCTCTCTTGTGGAAAGGCTAGAGGACTTTATAACGTTGATTTTGCTCCCTCTATTTTTCGCCACTAATGGCCTAAAAACTGATCTTGGACAGCTCGATGACGTCCGCGAATGGGTTACTTTGATCACTCTTGTTATTTTCACTAGCTTAGGCAAAATCATTGGCACTATGGTCGCTGCATTCTATTATCAAATATCAGTTCGTGATGGAGCAGTCCTTGGTTTGCTCCTGAACACAAAAGGCGTTGTTGAAATTATTGTCATTAACATTGGCAAGGATAAAAAGGTTTTGACCAACGAATCGTATGCAGCCTTGATGCTTATAACCATAATAATGACCGCAATCATTGTACCTGGGGTTTCATATATATACAAACCAATAAGAGGAGTGATACCTTACAAAAGAAGAACCATTCAAATGTCACAAAAAGAATCAGAGTTCAGAGTCCTAGTTTGTATCCACACTCCTCGAAATGTGCCGACAATTATTAACCTCCTTGACGCCACTAACCCTTCAAAGAGGTCCCCGATATGCATTTACTTGCTTCATTTGACCGAACTCAGTGGCCAGGCATCTGCATTATTCCTTGTTCAACATCATACTGCCAAGGATCCAGACCAACCAGTCTATTATAACAAGACTGAAGCTCAATCCGAACACATAATCAATGCCTTTCGAAACTACGAGCGTCATGCTTGCCACGTCTCAATGCAGCCCTCAATAGTCATCTCCCCTTACTCCACCATGCACGAGGACGTATGCAACTTGGCTCAGGAAAAGCGTGTGGCCTTCATTATCGTCCCTTTCCATAAACATCAAGCGGTTGACGGTGAAATGGCGCCCACCAACATGTCACACCGAACTGTGAACCTCCATATTCTAAGCCAAGCACCTTGCTCCGTTGGGATTCTAGTGGATAGAGGGTTTAGTGCGTGCAGCCATCTGGCTCCAGATCAAAAGTCTCGCAATGTGGCAGTGTTGTTCTTTGGAGGGCCTGATGATAGAGAAGCCCTGAGCTATGCATGGAAGATGTCAGAAAATCCAGGGATAAACCTTACTGTGATGCGTTTTGTTCATGGAGAAGAAGTAATGCATCAACATAGTGACCTCAGCCCTGACGAAAGTACGGTACTAAAAGTGAAAACGGATAAAGACAGTCATAAAAAACTTGATGAGAGGCTTATAAATTGGTTTAGGACAAGCTGTGAGGATGATGGCTCAGTTGTTTATGTCGAGAAAATGGTGAACAATGGAGAGCAGACAGTAGCAGCAATAAGGTCAATGGATGATATTCACGACCTTTTCATAATTGGGAGAAGCGAAGGAATGAAATCACCACTCATAGCAGGACTCACTGATTGGAGTGAGTGTCCTGAGTTAGGGGCAATTGGGGACTTGTTGGCTTCTTCAGATTTTGCAGCCACTGCTTCTGTGTTGATAGTGCAGCAATATCTTGGCCAAGGAACGGAAGATGTTTTCGAAACAAACCAGGAGGAGGAGCAGACACTATCACCATGA 2466 0.429 MKRKLETKSLAFDINETEPIICYAATMISSDGLWHKENPLYYSLPLFLVQLLLVLVITRLFVYILKPIRQPRVISELMGGLILGPSVLGKNKAFRDAVFPQRGEILLEAMASVGIVYFMFLVGVGMDATSLRRIGRKAVVIALLGMVLPFAIGALFTMYLIKFDDISAKNTANVLFIGSILSVAAFPVLVRILAELKFINSELGRIALSSALVNDLISSLLLILSVNLAQRNKPSITLLSTFLSSIGFIAFNIFVVRPGVLWMVRKTPEGETFSDFYMCIILAGVMLSGLITDIIGTHAVFGAFVFGLTIPNGPLGLSLVERLEDFITLILLPLFFATNGLKTDLGQLDDVREWVTLITLVIFTSLGKIIGTMVAAFYYQISVRDGAVLGLLLNTKGVVEIIVINIGKDKKVLTNESYAALMLITIIMTAIIVPGVSYIYKPIRGVIPYKRRTIQMSQKESEFRVLVCIHTPRNVPTIINLLDATNPSKRSPICIYLLHLTELSGQASALFLVQHHTAKDPDQPVYYNKTEAQSEHIINAFRNYERHACHVSMQPSIVISPYSTMHEDVCNLAQEKRVAFIIVPFHKHQAVDGEMAPTNMSHRTVNLHILSQAPCSVGILVDRGFSACSHLAPDQKSRNVAVLFFGGPDDREALSYAWKMSENPGINLTVMRFVHGEEVMHQHSDLSPDESTVLKVKTDKDSHKKLDERLINWFRTSCEDDGSVVYVEKMVNNGEQTVAAIRSMDDIHDLFIIGRSEGMKSPLIAGLTDWSECPELGAIGDLLASSDFAATASVLIVQQYLGQGTEDVFETNQEEEQTLSP* 822
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra1g1429 821 Gene3D - 486 767 - -
Vra1g1429 821 Gene3D - 46 444 IPR038770 -
Vra1g1429 821 PANTHER CATION/H+ EXCHANGER 3 16 811 - -
Vra1g1429 821 Pfam Sodium/hydrogen exchanger family 53 434 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Vra1g1429 821 PANTHER CATION/H + ANTIPORTER 16 811 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra1g1429 Vra-Chr1 21661560 21664253 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra1g1429 20 807 Antiporter Super Family AT2G13620 57.995 0.0 939
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra1g1429 - - gmx:100779048 1083.55