Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra1g1413 ATGAGCATTAATGCCAGAAACATTTATCTGTTCCATGGAATCAAGGTGATTGATGAAACAATGCGTGTGATTACATTCTCACCAGTGGTTTTTCGGGAGGCAAAGTCTGATGTCAATATCAATGGGTACTTAATTCCAAAAGGTTGGAAAGCAGTTGTGTGGTTCAGATCAGTTCACCTTGATCCTGAAATATATCCTAATCCAAAGGAATTTAACCCTTATAGAGGGAACAAAGAACACAAAGTGCAGAGTGTGGTAAGGGAGGCATACTCACCATCCATTAACCATCCACCATCAGAAGAAAGAAATGTATGA 315 0.3937 MSINARNIYLFHGIKVIDETMRVITFSPVVFREAKSDVNINGYLIPKGWKAVVWFRSVHLDPEIYPNPKEFNPYRGNKEHKVQSVVREAYSPSINHPPSEERNV* 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra1g1413 104 Pfam Cytochrome P450 15 90 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra1g1413 104 PANTHER CYTOCHROME P450 26 15 80 - -
Vra1g1413 104 PANTHER ENT-KAURENOIC ACID OXIDASE 2 15 80 - -
Vra1g1413 104 Gene3D Cytochrome P450 15 97 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra1g1413 104 PRINTS B-class P450 signature 15 26 IPR002397 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra1g1413 104 PRINTS B-class P450 signature 32 59 IPR002397 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra1g1413 104 PRINTS B-class P450 signature 60 75 IPR002397 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra1g1413 104 SUPERFAMILY Cytochrome P450 16 80 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra1g1413 Vra-Chr1 21526552 21530139 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra1g1413 15 75 Cytochrome P450 AT2G32440 72.131 6.08e-28 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra1g1413 K04123 - vra:111241295 214.542