Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra1g1395 ATGGAGTTCCTGGACGAGGACGCGAGGCCAAGGTTCGTGTTCCAGTCCGGTGCCGTTGCAAGCACCGAACCACCGTACCCGGACCACAAACCTACCAAGCCGTTCCTCTTCGTCACCATTTCTCTCTCTTCGCTCTTCCTCGCTCTATCTCTCTTCTTCCTCGAATCCGAACCCTTCAAATCGCTCCTATTCTGGCTCGCGCTCTCTCTCCTCATCGGCCCCTTCGCTCCCCCCTCCCTCACCGGCGGCGACGTCCGCGTCGGCCTCGGCGAGATCGTCAACTTCCCTGATCCGGAGCCCGAAACCGACGACGACGCTAGGAAGCCTCCGCAGCGGCGATCCAGACAGCGGAGGCCCGAGGAAGTCGCCGCCATCGGCCCAGTGGTGTCCGTCAGCACCGCGGAGAAGAAGAGAGGAGGAGGCGGCGGAGTGGAGAAGGTTTCGACGGTGGTGGAGGAGAAGGATTGGAGCGAGGAGGATGTGGAGGTGCTGAAGAAGCAGCTGGTGAAGAATCCGGTGGGGAAGCCAGGGCGGTGGGAGGCTATAGCGGCAGCATTCGGCGGAAGGCACGGTGTTGAGAGTGTGATAAAGAAGGCAAAGGAGTTGGGGGAGAAGAAAGTGGATGATTCGGATTCTTATGCATTGTTCTTGAAAAATAGGAAGGCGTTGGATAAGAGGGTTGTGGAGGAGAATGGGGGTGAGGACTCGGTGACGGTGGAGAAAGTAGTTGAGAATGGTTGGAGTTCTGGCGAGGATATCGCGTTGCTGAATGCATTGAAAGTGTTTCCTAAGGATGTTTCAATGAGGTGGGAGAAGGTTGCTGCGGCGGTTCCCGGGAGATCCAAAGCTGCTTGCATGAGAAGATTTACTGAATTGAAGAAAGGGTTTCGGAATGCAAAAGCTGCAGCCGAGTGA 915 0.5694 MEFLDEDARPRFVFQSGAVASTEPPYPDHKPTKPFLFVTISLSSLFLALSLFFLESEPFKSLLFWLALSLLIGPFAPPSLTGGDVRVGLGEIVNFPDPEPETDDDARKPPQRRSRQRRPEEVAAIGPVVSVSTAEKKRGGGGGVEKVSTVVEEKDWSEEDVEVLKKQLVKNPVGKPGRWEAIAAAFGGRHGVESVIKKAKELGEKKVDDSDSYALFLKNRKALDKRVVEENGGEDSVTVEKVVENGWSSGEDIALLNALKVFPKDVSMRWEKVAAAVPGRSKAACMRRFTELKKGFRNAKAAAE* 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra1g1395 304 SUPERFAMILY Homeodomain-like 154 193 IPR009057 -
Vra1g1395 304 MobiDBLite consensus disorder prediction 91 121 - -
Vra1g1395 304 CDD SANT 156 202 IPR001005 -
Vra1g1395 304 Gene3D - 241 304 - -
Vra1g1395 304 SUPERFAMILY Homeodomain-like 243 294 IPR009057 -
Vra1g1395 304 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 2 1 304 IPR044634 GO:0006450|GO:0030544|GO:0043022|GO:0051083
Vra1g1395 304 MobiDBLite consensus disorder prediction 100 120 - -
Vra1g1395 304 Gene3D - 150 208 - -
Vra1g1395 304 SMART sant 243 295 IPR001005 -
Vra1g1395 304 SMART sant 152 205 IPR001005 -
Vra1g1395 304 CDD SANT 247 293 IPR001005 -
Vra1g1395 304 ProSiteProfiles Myb-like domain profile. 239 293 IPR001005 -
Vra1g1395 304 PANTHER TRANSCRIPTION FACTOR MAMYB 1 304 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Vra1g1395 Myb_DNA-binding 1.9e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra1g1395 - - gsj:114413206 459.144