Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra1g1391 ATGTCTGCCATGAACTCCAGTGTCTTGGCCTGTAACTATGCAAGATCAGGATGCTCCGACCTCAATGCCAAGCTCACCTCCATGCCTTCTTCTGTTGCATCTCCACAAGTTTCTGCTCTCAAGTTGCCTGTGATCAAGGCTCATCAAGCAAAGATTACGGAATCTGAATCAAACCAAGGAAGAAGAAGTGCCCTTGTCTACTTAGCAGCTACCCTTTTCACTGCTGCAGCTTCTGCTTCCAACTCTTCAGCCAATGCAGGAATCATTGAAGAATACCTTGAAAAGAGCAAGACCAACAAGGAACTTAATGACAAGAAAAGATTAGCCACCACTGGAGCCAACTTTGCAAGAGCATACACTGTGGAATTTGGCACTTGCAAGTTCCCTGAAAACTTCACCGGTTGCCAAGATCTAGCTAAGCAAAAGGTACTTTTCAACTTTCTTTTCAATGTGAAGGAAAGGACAAATACAAGTGTGGTTCGAATGTTTTCTGGAAATGGTGAAATTGACAACATTTTCCCGTGTCAAGCTTCTCCTTGA 540 0.437 MSAMNSSVLACNYARSGCSDLNAKLTSMPSSVASPQVSALKLPVIKAHQAKITESESNQGRRSALVYLAATLFTAAASASNSSANAGIIEEYLEKSKTNKELNDKKRLATTGANFARAYTVEFGTCKFPENFTGCQDLAKQKVLFNFLFNVKERTNTSVVRMFSGNGEIDNIFPCQASP* 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra1g1391 179 Pfam Photosystem I reaction centre subunit N (PSAN or PSI-N) 44 143 IPR008796 GO:0009522|GO:0015979
Vra1g1391 179 PANTHER PHOTOSYSTEM I REACTION CENTER SUBUNIT N, CHLOROPLASTIC 1 143 IPR008796 GO:0009522|GO:0015979
Vra1g1391 179 PANTHER PHOTOSYSTEM I REACTION CENTER SUBUNIT N, CHLOROPLASTIC 1 143 - -
Vra1g1391 179 Gene3D - 87 158 IPR044907 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra1g1391 1 168 Calmodulin-binding Proteins AT5G64040 62.428 3.38e-69 206
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra1g1391 K02701 - csv:101204396 185.267