Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra1g1385 ATGAAAGGAAACAAGCCTTATCTAGTTGTGATCCTCATACAAGCCATCTACGCTGCTATGTTTCTGCTCTCAAAAGCAGCATTTGACCATGGCATGAACAATTTCATCTTTGTCTTCTATAGACAGATCGCAGCCACCATATTCCTCATCCCTTTCGCTTTCTTCTTTGAATGGAAAACTGCACCTCCTTTGTCATTCGTGGCCTTCTGCAAGATCTTTTTTCTTTCTTTTCTGGGGATCACTGCCAGCTTGGACATATATGGTATTGCCCTTGTTTATACTTCTGCTACTTTGGCTGCTGCTATCACAAACTGTCTCCCAGCCATCACCTTTTTCTTAGCGTTACTGCTCAGGATAGAAGTTTTGAAGGTAAAGACTGCTCCTGGTATTGCTAAGTTGGTTGGAGTAGTGGCATGCTTAACTGGAGCAGCAATCCTTGCTTTCTATAAAGGTCCTCATTTGGAGCTTTTAAGCCATTATAACCTTTTAGGGTACCATAAAAGCCAACAACACCTGGGTCATGTTGCATCTAGTTCATGGATAAAGGGTTGCTTCCTCATGCTCCTCTCCAGCACCTTTTGGGGAATGTGGCTTGTGCTACAGACTTTTGTCATTAAAGACTACCCTTCAAAGCTGCTCCTCACAACTCTTCAGTGTTTCTTAAGCTCCATTCAGTCTTTGGGCATTGCTTTGGCAGTAGAAAGAGACATTGAGCAATGGAAATTAGGGTGGAATGTCAGACTCCTTGCTGTTGTTTACTGTGGAATTATGGTGACTGGTGTAACATATTACTTACAAGCTTGGGTTATAGAGAAGAAAGGACCAGTGTTTCTGGCCATGGCAACACCACTGTCTCTCATAATGACCATCTTCTCCTCCACGTTTATCTTGGGCGAAATAATAACTTTGGGAAGCATTTTAGGCAGCATCGCTTTGGTTATTGGACTTTACTGTGTGCTGTGGGGAAAGAGCAGAGAGCAAATGCCAAAAGCTTCCTCGGATTTGGAGGAGGCATCATCGACTTAG 1026 0.4327 MKGNKPYLVVILIQAIYAAMFLLSKAAFDHGMNNFIFVFYRQIAATIFLIPFAFFFEWKTAPPLSFVAFCKIFFLSFLGITASLDIYGIALVYTSATLAAAITNCLPAITFFLALLLRIEVLKVKTAPGIAKLVGVVACLTGAAILAFYKGPHLELLSHYNLLGYHKSQQHLGHVASSSWIKGCFLMLLSSTFWGMWLVLQTFVIKDYPSKLLLTTLQCFLSSIQSLGIALAVERDIEQWKLGWNVRLLAVVYCGIMVTGVTYYLQAWVIEKKGPVFLAMATPLSLIMTIFSSTFILGEIITLGSILGSIALVIGLYCVLWGKSREQMPKASSDLEEASST* 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra1g1385 341 PANTHER WAT1-RELATED PROTEIN 7 328 - -
Vra1g1385 341 Pfam EamA-like transporter family 5 145 IPR000620 GO:0016020|GO:0016021
Vra1g1385 341 Pfam EamA-like transporter family 182 320 IPR000620 GO:0016020|GO:0016021
Vra1g1385 341 PANTHER WAT1-RELATED PROTEIN 7 328 IPR030184 GO:0016021|GO:0022857
Vra1g1385 341 SUPERFAMILY Multidrug resistance efflux transporter EmrE 40 150 - -
Vra1g1385 341 SUPERFAMILY Multidrug resistance efflux transporter EmrE 244 325 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra1g1385 Vra-Chr1 21262434 21266222 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra1g1385 1 254 Nodulin-like Gene Family AT5G64700 62.403 5.74e-99 291
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra1g1385 - - gmx:100775854 610.142