Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra1g1337 ATGATTTGGATAGCGATTCTTTTGCTTTCTCTTGCTTGTCTGTGGCTGTGGAGAAGGAACAGCAAGGGAAAGAAATTACCACCGGGTCCACGAGGGTTGCCAATTTTGGGTAGCCTTCACAAGTTGGGACCAAATCCCCATCGTGATCTGCACCAACTAGCCAAAGAATATGGATCTGTCATGTACTTGCGGTTAGGTGTTGTGCCCACTATCGTTGTTTCTTCACCCCAAGCTGCTGAGCTCTTCCTCAAGACCCATGACCTTGTTTTTGCTAGTAGACCACCTCATGAAGCTGCAAGATACATCTCTTGGGAGCAGAGGAACTTAAGCTTTGGTGAATATGGTTCTTACTGGCGCAACATGCGGAAGATGTGCACGTTGGAATTGCTAAGCCAAACCAAGATTAACTCCTTCAGAAGCATGAGGGAAGAGGAGCTTGACCTATTGATCAAGGATCTGAGAGAGGCAGCCAAAGATGGAGCTGCTGTTAATCTCAGCGCTAAAGTCTCAACACTCAGCGCAAACATGGCTTGTAGAATGGTCTTAGGGAAAAAGTACATGGACAAGGACTTGGATGAGAAAGGGTTCAAGGCTGTGATGCAAGAGGGAATGCATTTATCAGCAACTCCTAACATGGGAGATTACATCCCTTACATCGGTGCACTTGACCTACAAGGCTTAAAGAAGCGCATGAAAGTAGTTGGCAAAATCTTCGATGACTTCTTTGAGAAAATCATTGACGAGCACATGCAATCACAGAAGGGAGAAGACAAGACAAAGGATTTTGTTGATGTCATGTTGGGATTCGTGGGTACTGAAGAATCCGAATACCGAATTGAGAGGCCCAATATCAAAGCCATATTGTTGGATATGTTGGCTGGCTCGATGGATACTTCTGCTACAGCAATAGAGTGGACACTTTCAGAGCTGCTAAAGAATCCAAGGGTGATGAAGAAAGTTCAAATGGAATTGGAAAGCATGGTGGGTATGGAGAGGAAGGTGAAAGAATCAGACTTAGAGAAGTTAGAGTATTTGGACATGGTTGTAAAGGAAAGCCTGAGACTGCATCCGGTGGCACCTTTGCTGATACCACACCAGTCCATAGAAGACTGCATGGTTGGAGATTATTTCATTCCTAAAAAATCAAGGGTTATAGTGAATGCATGGGCTATTATGAGAGACCCAAGTGCTTGGGATGAACCAGAGAAATTCTGGCCAGAGAGATTTGAAGGAAGGAACATAGATGTTAGAGGGCGTGAGTTTGAGCTGATACCATTTGGGTCTGGCAGAAGAGGGTGTCCAGGAATACAGTTGGGTCTAACTGTGATTCGTCATACAGTCGCACAAGTCGTCCATTGTTTTGATTGGAAGCTTCCAAATAACATGTTACCATCTGAGTTGGATATGGCAGATGAGTTTGGCCTCACAATGCCAAGAGCTAATCCTCTGCGGGCCGTTCCTTCTTACAGGCTTTCCACTGAAATAGACTATTGA 1494 0.4491 MIWIAILLLSLACLWLWRRNSKGKKLPPGPRGLPILGSLHKLGPNPHRDLHQLAKEYGSVMYLRLGVVPTIVVSSPQAAELFLKTHDLVFASRPPHEAARYISWEQRNLSFGEYGSYWRNMRKMCTLELLSQTKINSFRSMREEELDLLIKDLREAAKDGAAVNLSAKVSTLSANMACRMVLGKKYMDKDLDEKGFKAVMQEGMHLSATPNMGDYIPYIGALDLQGLKKRMKVVGKIFDDFFEKIIDEHMQSQKGEDKTKDFVDVMLGFVGTEESEYRIERPNIKAILLDMLAGSMDTSATAIEWTLSELLKNPRVMKKVQMELESMVGMERKVKESDLEKLEYLDMVVKESLRLHPVAPLLIPHQSIEDCMVGDYFIPKKSRVIVNAWAIMRDPSAWDEPEKFWPERFEGRNIDVRGREFELIPFGSGRRGCPGIQLGLTVIRHTVAQVVHCFDWKLPNNMLPSELDMADEFGLTMPRANPLRAVPSYRLSTEIDY* 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra1g1337 497 PANTHER CYTOCHROME P450 93A3-LIKE 1 492 - -
Vra1g1337 497 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 426 435 IPR017972 GO:0005506|GO:0016705
Vra1g1337 497 PRINTS P450 superfamily signature 294 311 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra1g1337 497 PRINTS P450 superfamily signature 347 358 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra1g1337 497 PRINTS P450 superfamily signature 424 433 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra1g1337 497 SUPERFAMILY Cytochrome P450 27 490 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra1g1337 497 Pfam Cytochrome P450 27 472 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra1g1337 497 PRINTS E-class P450 group I signature 54 73 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra1g1337 497 PRINTS E-class P450 group I signature 172 190 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra1g1337 497 PRINTS E-class P450 group I signature 283 300 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra1g1337 497 PRINTS E-class P450 group I signature 303 329 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra1g1337 497 PRINTS E-class P450 group I signature 346 364 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra1g1337 497 PRINTS E-class P450 group I signature 387 411 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra1g1337 497 PRINTS E-class P450 group I signature 423 433 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra1g1337 497 PRINTS E-class P450 group I signature 433 456 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra1g1337 497 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 1 492 - -
Vra1g1337 497 Gene3D Cytochrome P450 15 488 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra1g1337 Vra-Chr1 20802879 20804799 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra1g1337 2 488 Cytochrome P450 AT3G26300 39.596 1.04e-131 389
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra1g1337 K20562 - gmx:100809526 851.277