Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra1g1207 ATGGCATCCAAAGTTTATGAGCGAACTCTTGAGGAAACTCCAACATGGGCTGTTGCAGTTGTGTGTTTTGTGCTGCTTGCTGTTTCAATCGCCATAGAACATCTTATTCATGGTATTGGAAAGTGGTTTAAGAAGAAACGAAAAAATGCTCTATTCGAAGCGTTGGAGAAGGTCAAAGGAGAGCTTATGGTGCTAGGATTCATATCCTTGCTCTTAAGTGTTTTGCAAGATCAAATTTCAAAGATCTGCGTGTCGAAACATGTTGCATCCACGTGGCATCCTTGTGAGAACCCAAAGTCCTCAACTACTACATCTGAGGATGAATCTGAGGACATTCAGATAAATTATAGGAAACTGCTACAACTTTATGACTCTATACCAAGGCGTGTTCTCGCGACAAAAGGTTACGACAAGTGCGCTGAAAAGGGAAAAGTTGCTTTTGTTTCAGCATATGGGATTCACCAGCTGCATATATTCATCTTTGTGTTAGCAATATTTCATATCCTACAGTGCATAATAACACTGGGTTTGGGAAGAACCAAGATGAGAAAATGGAGGGCATGGGAAAATGAAACCAAGACCATTGAATATCAATTTTACAACGATCCTGAGAGGTTCAGATTTGCAAGGGACACAACATTTGGAAGAAGACACTTGAGTCCTTGGAGTCAGTCAACAATTTCCTTATCCATTGTTAGCTTCTTCCGACAATTCTTTGGATCAGTCAACAAAGTGGATTATTTAACATTACGACATGGATTCATCACGGCGCATCTGGCACCGGGAAGTGATGCAAGATTTGATTTCCAAAAGTACATCGAAAGATCACTTGAAGAGGATTTTAAAACTGTTGTGGGAATAAGCCCAGTCATATGGTTCTTTGCGGTGCTATTCCTTCTGACAAATACTCATGGGTGGTATTCTTATTATTGGCTTCCATTCATCCCATTTATTATAATCTTAATAGTGGGTGCTAAACTTCAAATGATAATAACAAAGATGGGACTGAGGATTACAGACAGAGGAGAAGTTGTCAAAGGTGCACCTCTGGTTGAACCAGGAGATGACCTGTTCTGGTTCAACCGTCCACGCCTCCTCCTCTTTTTGATTCATCTCGTGCTCTTTCAGAATGCTTTTCAGCTGGCATTTTTTTCTTGGAGTACTTATGAATTCTCCCTACACTCTTGCTTCCACGAAACAACTGCAGATATTGTCATTAGACTTACAATGGGGGTTATCATACAAGTTTTATGCAGCTATGTGACACTACCTCTATATGCTCTAGTCACACAGATGGGTTCAACCATGAAACCTACCATCTTCAATCAGAGAGTGGCATCAGCACTGAAGAACTGGCACAACACTGCCAAAAAGCAAGTAAAAAGCAGTAAGCCAACCACACCATTATCAAGCAGGCCATCAACGCCAACCTATGGTATGTCTCCTATGCATCTGCTGCAAAAACACCTTGCTGGTAGAAGTGATAGTGCACAAACATCTCCTAGGACATCCAACTATGAAAATGAACAATGGGATATTGAAGGATCACCTTCCAAAAGCAACCATGCAGCTGGTGAAGAAACTCAAATGCAAGTTATGGAGTCAGGCTCAAGCTCAGCACCAGAATTGCCTACAAGCTCTCAGCTTGAAATCAGAAGTCATTTGGAGAGTGAGGCATAA 1680 0.4131 MASKVYERTLEETPTWAVAVVCFVLLAVSIAIEHLIHGIGKWFKKKRKNALFEALEKVKGELMVLGFISLLLSVLQDQISKICVSKHVASTWHPCENPKSSTTTSEDESEDIQINYRKLLQLYDSIPRRVLATKGYDKCAEKGKVAFVSAYGIHQLHIFIFVLAIFHILQCIITLGLGRTKMRKWRAWENETKTIEYQFYNDPERFRFARDTTFGRRHLSPWSQSTISLSIVSFFRQFFGSVNKVDYLTLRHGFITAHLAPGSDARFDFQKYIERSLEEDFKTVVGISPVIWFFAVLFLLTNTHGWYSYYWLPFIPFIIILIVGAKLQMIITKMGLRITDRGEVVKGAPLVEPGDDLFWFNRPRLLLFLIHLVLFQNAFQLAFFSWSTYEFSLHSCFHETTADIVIRLTMGVIIQVLCSYVTLPLYALVTQMGSTMKPTIFNQRVASALKNWHNTAKKQVKSSKPTTPLSSRPSTPTYGMSPMHLLQKHLAGRSDSAQTSPRTSNYENEQWDIEGSPSKSNHAAGEETQMQVMESGSSSAPELPTSSQLEIRSHLESEA* 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra1g1207 559 PANTHER MLO-LIKE PROTEIN 1 3 535 IPR004326 GO:0006952|GO:0016021
Vra1g1207 559 MobiDBLite consensus disorder prediction 492 552 - -
Vra1g1207 559 MobiDBLite consensus disorder prediction 456 481 - -
Vra1g1207 559 Pfam Mlo family 7 489 IPR004326 GO:0006952|GO:0016021
Vra1g1207 559 MobiDBLite consensus disorder prediction 456 559 - -
Vra1g1207 559 PANTHER MLO-LIKE PROTEIN 3 535 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra1g1207 Vra-Chr1 16269258 16276713 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra1g1207 5 558 MLO family AT2G39200 65.271 0.0 750
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra1g1207 K08472 - gmx:100817285 955.281