Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra1g1176 ATGGCTCTGTTATATTATGGTTTGGTGATAGTAGTTTTTGTGTATTCTCTTAAGGTGTTGTTTGGATCTAGAAAATTAAGAAACCTTCCTCCAGGGCCTTTTGCTTACCCTATAGTAGGAAACCTCTTGCAACTTCAACAGCCTTTTCACCGTTATTTCACTCGATTGTCCAAAAAACATGGCAAAGTCTTCTCTCTATGGTTCGGCAACCGTCTCGTTATAGTTGCTTCTGACCTACCCGTGGTGCAAGAATGCTTCACCAAAAACGACACCGTCTTGGCTAACCGACCCCACTTTCTCCTTGGCAAACACATCAGTTACAACAACAGCACCATCCTTCACTCCTGTTACGGTGAACATTGGCGCCATCTCCGCCGCATCTTGTCCCTCGAGGTTGTCTCAACACACCGTTTGAATGCCTCCTACGATATCCGACGAGACGAACTCACCAAACTCTTGCAGAAACTTGCTCGCATCTCGCGCAACGACTTCACTAAAGTCGATCTCAAATCCATGGTCATGGAAACGTCACTTAATACTATGATGAGGCTCGTGTCCGGAAAGAGATTCTACGGTGATGACTGTGATGTGAGTGATGTGGAGAAGGCCAAAGAATTTAGAGGCATCCTTAGAGAAATGGTGTCATTAGCAGGAGTAAACAACCGTGGAGATTTCTTGCCTTTCATGAGGTGGTTTGATTTAGATAATTTGGAGAAGAGGCTAAAGAATATTGGAAAGAGAATCGATGCATTCTTACAATCACTCATTGACGAAATCCGTGCTTCAAATAAGACTACCAATACTATGATATCTCAGCTCTTAGTTCAGCAACGAACACAACCTGAACAATACAGCGATCAAATTATCAAAGGACTTTGCATGAGTATGTTACTTGCAGGAACAGATACGTCAGCTTTGACTTTAGAATGGGGAATGGCTAATTTATTGAACCATCCAGAAGTTTTAAAGAGAGCAAAAGAAGAGCTAGACACTCATGTGGGATCAGATCATCTGGTAGAAGAATCAGATATGTCAAAACTTCCTTATGTTCTAAACATCTTTTTCGAGACGATAAGATTGCATCCTGCTGCTCCACTTTGGTCACCACATATGTCTTCAGAAGATTGTACCATCGGAGGATATAATCTCCCAAAGAACACAATTTTGTTGGTTAATGCATGGTCCATTCATCACGATCCAACTTTGTGGAAGAACCCATATGAATTTAGGCCTGAAAGGTTTGAGAAGGAATGTGACTCAAGCAAATTGCTTTCATTTGGATTAGGGAGGAGGTCTTGTCCTGGAAACAACTTGGCTCAACGTTCTGTGGGATTAGCTTTGGCTTCATTGATTCAATGTTTTGAGTGGCAACGAATTGGTAAGGAAGACATTGATATGACTGAAGCAAAGGGAATCACTATATCAAGGCAAAACCCATTGGAAGTTATGTGCAAAGCTCGTCAAATCCCAGCTGTNACGGATCTGTATTGA 1491 0.4199 MALLYYGLVIVVFVYSLKVLFGSRKLRNLPPGPFAYPIVGNLLQLQQPFHRYFTRLSKKHGKVFSLWFGNRLVIVASDLPVVQECFTKNDTVLANRPHFLLGKHISYNNSTILHSCYGEHWRHLRRILSLEVVSTHRLNASYDIRRDELTKLLQKLARISRNDFTKVDLKSMVMETSLNTMMRLVSGKRFYGDDCDVSDVEKAKEFRGILREMVSLAGVNNRGDFLPFMRWFDLDNLEKRLKNIGKRIDAFLQSLIDEIRASNKTTNTMISQLLVQQRTQPEQYSDQIIKGLCMSMLLAGTDTSALTLEWGMANLLNHPEVLKRAKEELDTHVGSDHLVEESDMSKLPYVLNIFFETIRLHPAAPLWSPHMSSEDCTIGGYNLPKNTILLVNAWSIHHDPTLWKNPYEFRPERFEKECDSSKLLSFGLGRRSCPGNNLAQRSVGLALASLIQCFEWQRIGKEDIDMTEAKGITISRQNPLEVMCKARQIPAVTDLY* 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra1g1176 496 Pfam Cytochrome P450 30 474 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra1g1176 496 PRINTS E-class P450 group I signature 57 76 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra1g1176 496 PRINTS E-class P450 group I signature 81 102 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra1g1176 496 PRINTS E-class P450 group I signature 176 194 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra1g1176 496 PRINTS E-class P450 group I signature 288 305 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra1g1176 496 PRINTS E-class P450 group I signature 308 334 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra1g1176 496 PRINTS E-class P450 group I signature 351 369 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra1g1176 496 PRINTS E-class P450 group I signature 392 416 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra1g1176 496 PRINTS E-class P450 group I signature 423 433 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra1g1176 496 PRINTS E-class P450 group I signature 433 456 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra1g1176 496 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 8 487 - -
Vra1g1176 496 Gene3D Cytochrome P450 22 492 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra1g1176 496 Coils Coil 234 254 - -
Vra1g1176 496 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 426 435 IPR017972 GO:0005506|GO:0016705
Vra1g1176 496 PANTHER CYTOCHROME P450, FAMILY 81, SUBFAMILY D, POLYPEPTIDE 2-RELATED 8 487 - -
Vra1g1176 496 SUPERFAMILY Cytochrome P450 30 487 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra1g1176 496 PRINTS P450 superfamily signature 299 316 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra1g1176 496 PRINTS P450 superfamily signature 352 363 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra1g1176 496 PRINTS P450 superfamily signature 424 433 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra1g1176 496 PRINTS P450 superfamily signature 433 444 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra1g1176 Vra-Chr1 15337848 15339873 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra1g1176 10 496 Cytochrome P450 AT4G37370 49.287 0.0 517
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra1g1176 K13260 - gmx:100811727 662.914