Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vra1g1140 ATGTACACTTCGAGGAAGAAAATTCTCAAGGATAAGGATGCAGAGCCCACTGAACTTGAAGAGACAGTTGCACAGTATTTATTTGACTTGGAGAATACCAACCAGGATCTGAAAAGTGACTTGAAGGATCTCTATATAAATCAAGCAATTCAAATGGATGTGGCCAATAATCGCAAGGCTGTAGTCATCTATGTGCCTTTCAGATTGAGAAAAGCATTCCACAAGATTCATCTCCGACTTGTCAGGGAGTTGGAGAAGAAATTTAGCGGGAAGGATGTTATTTTGATTACCACAAGGAGGATCTTGCGTCCACCAAAGAAGGGCTCTGCCGTTCAGCGTCCCAGGACCCGGACATTGACTGCAGTTCATGATGCCATGCTAGAGGATGTTGTATATCCTGCAGAGATTGTTGGAAAAAGGGTCAGATTTAGAATTGATGGCTCAAAAATAGTGAAGGTTTTCTTGGATCCCAAGGAGCGCAATAACACCGAGTACAAGCTGGAGACATTTTCTGGAGTTTACAGGAAGCTTACTGGAAAAGATGTAGTATTTGATTATCCAGGCACAGAAGCCTGA 576 0.4271 MYTSRKKILKDKDAEPTELEETVAQYLFDLENTNQDLKSDLKDLYINQAIQMDVANNRKAVVIYVPFRLRKAFHKIHLRLVRELEKKFSGKDVILITTRRILRPPKKGSAVQRPRTRTLTAVHDAMLEDVVYPAEIVGKRVRFRIDGSKIVKVFLDPKERNNTEYKLETFSGVYRKLTGKDVVFDYPGTEA* 192
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vra1g1140 191 Pfam Ribosomal protein S7e 7 186 IPR000554 GO:0003735|GO:0005840|GO:0006412
Vra1g1140 191 Coils Coil 27 47 - -
Vra1g1140 191 PANTHER 40S RIBOSOMAL PROTEIN S7 2 191 IPR000554 GO:0003735|GO:0005840|GO:0006412
Vra1g1140 191 ProSitePatterns Ribosomal protein S7e signature. 79 92 IPR000554 GO:0003735|GO:0005840|GO:0006412
Vra1g1140 191 PANTHER 40S RIBOSOMAL PROTEIN S7 2 191 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Vra1g1140 Vra-Chr1 14291918 14294264 Dispersed/Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra1g1140 1 187 Cytoplasmic Ribosomal Protein Gene Family AT5G16130 80.214 7.19e-113 318
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra1g1140 1 14291918 14294264 Vra1g1140 1 14291918 14294264 ECH