Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vra1g1140 | ATGTACACTTCGAGGAAGAAAATTCTCAAGGATAAGGATGCAGAGCCCACTGAACTTGAAGAGACAGTTGCACAGTATTTATTTGACTTGGAGAATACCAACCAGGATCTGAAAAGTGACTTGAAGGATCTCTATATAAATCAAGCAATTCAAATGGATGTGGCCAATAATCGCAAGGCTGTAGTCATCTATGTGCCTTTCAGATTGAGAAAAGCATTCCACAAGATTCATCTCCGACTTGTCAGGGAGTTGGAGAAGAAATTTAGCGGGAAGGATGTTATTTTGATTACCACAAGGAGGATCTTGCGTCCACCAAAGAAGGGCTCTGCCGTTCAGCGTCCCAGGACCCGGACATTGACTGCAGTTCATGATGCCATGCTAGAGGATGTTGTATATCCTGCAGAGATTGTTGGAAAAAGGGTCAGATTTAGAATTGATGGCTCAAAAATAGTGAAGGTTTTCTTGGATCCCAAGGAGCGCAATAACACCGAGTACAAGCTGGAGACATTTTCTGGAGTTTACAGGAAGCTTACTGGAAAAGATGTAGTATTTGATTATCCAGGCACAGAAGCCTGA | 576 | 0.4271 | MYTSRKKILKDKDAEPTELEETVAQYLFDLENTNQDLKSDLKDLYINQAIQMDVANNRKAVVIYVPFRLRKAFHKIHLRLVRELEKKFSGKDVILITTRRILRPPKKGSAVQRPRTRTLTAVHDAMLEDVVYPAEIVGKRVRFRIDGSKIVKVFLDPKERNNTEYKLETFSGVYRKLTGKDVVFDYPGTEA* | 192 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vra1g1140 | 191 | Pfam | Ribosomal protein S7e | 7 | 186 | IPR000554 | GO:0003735|GO:0005840|GO:0006412 | |
Vra1g1140 | 191 | Coils | Coil | 27 | 47 | - | - | |
Vra1g1140 | 191 | PANTHER | 40S RIBOSOMAL PROTEIN S7 | 2 | 191 | IPR000554 | GO:0003735|GO:0005840|GO:0006412 | |
Vra1g1140 | 191 | ProSitePatterns | Ribosomal protein S7e signature. | 79 | 92 | IPR000554 | GO:0003735|GO:0005840|GO:0006412 | |
Vra1g1140 | 191 | PANTHER | 40S RIBOSOMAL PROTEIN S7 | 2 | 191 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vra1g1140 | Vra-Chr1 | 14291918 | 14294264 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vra1g1140 | 1 | 187 | Cytoplasmic Ribosomal Protein Gene Family | AT5G16130 | 80.214 | 7.19e-113 | 318 |