Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra1g1017 ATGGAGGATAGGATGAAGAAGAGGGTGCTTTCTCCACCAATTGTGCTTCTCTTTCTAGCTTTATCACTTCTTCTCTTGCTTCCAGAAGCTTCTGCTACAAAGTTTAACGTTGGAGATAACAAGTTTTGGAACCCCAATATCAACTACACTGAATGGGCCAAAGGAAAACATTTCTACCTTGGAGATTGGCTGTATTTTGTTTACGACAGGAACCAAGCTAGCGTGCTGGAAGTGAACAAGACCGATTATGAGACTTGTAACTCTGATCATCCGATCACAAACTGGACAAGGGGTGCAGGAAGAGACGTTGTTCCTCTAAACGTAACCAAAACCTACTACATCATCAGTGGCAAAGGGTTCTGCTTCAGTGGCATGAAGGTGGCTGTTCATGTCGAAAAGCTACCACCTCCGCCGAAAGCCGCCCCTGTAAAATCCGGCGCACCAACACTCTTCTCCACCGGCCACATTCTTCTCACGCCGGTTGTTTTCGCCGTCGGAGCAGCGTGGGATGCATTCATTCATTTCTGGTAG 531 0.4708 MEDRMKKRVLSPPIVLLFLALSLLLLLPEASATKFNVGDNKFWNPNINYTEWAKGKHFYLGDWLYFVYDRNQASVLEVNKTDYETCNSDHPITNWTRGAGRDVVPLNVTKTYYIISGKGFCFSGMKVAVHVEKLPPPPKAAPVKSGAPTLFSTGHILLTPVVFAVGAAWDAFIHFW* 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra1g1017 176 Pfam Plastocyanin-like domain 43 125 IPR003245 GO:0009055
Vra1g1017 176 PANTHER LAMIN-LIKE PROTEIN 13 167 - -
Vra1g1017 176 PANTHER BLUE COPPER PROTEIN 13 167 IPR039391 GO:0009055
Vra1g1017 176 SUPERFAMILY Cupredoxins 32 131 IPR008972 -
Vra1g1017 176 ProSiteProfiles Phytocyanin domain profile. 33 133 IPR003245 GO:0009055
Vra1g1017 176 Gene3D - 31 134 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra1g1017 Vra-Chr1 12113231 12115711 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra1g1017 14 176 Phytocyanin Superfamily AT5G15350 59.394 7.95e-70 207
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra1g1017 - - gmx:100305564 298.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra1g1017 1 12113231 12115711 Vra1g1017 1 12113231 12115711 ECH