Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra1g0987 ATGACCACAACCACAATGCATAGCTACAAACTCTCTCTCAAAAGAGCCACAAAGAGAACAAGAACAACAAGAAGAACAAGAAGAAGAAGAAATCACCCACTTAGCCAAAATCTCATCACCACAATTGACCCCTCCAACCATGAAAAGTGCCACAAAAATTCCCAGAAACTGTCACAAAAGCTTGAGGCTTTGAAGAACCTCATTCCCACAACGAACACCACCGAAGAAGAGGCTGTGAAACCGGACCAGCTGTTCAAGGAAACCGCAGATTACATCGTGCTGCTGCGGACACGTGTGGTGGTGCTGCAGAAACTCATTGAGTATTATGGGAGCAACAGCACCCAGAACGATGAACATGCTTTGTTGTTACAGTAG 375 0.4533 MTTTTMHSYKLSLKRATKRTRTTRRTRRRRNHPLSQNLITTIDPSNHEKCHKNSQKLSQKLEALKNLIPTTNTTEEEAVKPDQLFKETADYIVLLRTRVVVLQKLIEYYGSNSTQNDEHALLLQ* 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra1g0987 124 CDD bHLH_AtIBH1_like 48 106 IPR044549 GO:0006355
Vra1g0987 124 MobiDBLite consensus disorder prediction 1 35 - -
Vra1g0987 124 Coils Coil 47 67 - -
Vra1g0987 124 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 2 118 IPR044660 GO:0006355
Vra1g0987 124 MobiDBLite consensus disorder prediction 12 32 - -
Vra1g0987 124 PANTHER TRANSCRIPTION FACTOR UPBEAT-LIKE PROTEIN 2 118 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra1g0987 48 107 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G47270 33.333 5.61e-06 40.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra1g0987 - - gmx:102659957 128.257