Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra1g0972 ATGAAACCTTTCAAAAGTTTATATATTAGAAAAAGATTTTGCAGAAGCATAACGAAGTTCTTAGCCATGGAGGAAGCAAGAAGTTTGAAAGTTGTGGAAGTTTGCAGTGTGGCACCATCAGAGGCAGCAGCAGCAACTACCAATTGCTCCACTCCGACATCTTTGTCTCTGACATTCTTTGACCTACTATGGTTAAGGAGTCCCCCAGTCGAACGTGTTTTCTTCTATCAACTTCCCAACACAACCATCTCCTTCTTCGACACCATTCTTCCCAATCTCAAACTCTCTCTTTCTCTCACACTTCAACACTTTCTCCCTCTTGCTGGCACCATCACATGGCCCCTTGAATCTCCACACCCCATCATCAACTATGTCCCTGGCGATGCCGTTTCCTTCACCATAGCTGAATCCACCACTGATTTCAACATGCTTTGTTCCAATACCTGTCAGGCTTCTCTGCTCCATCATCTGATACCCCACTTGCCCACTTCCGATGAACAAGCATCCGTGATGGCCCTCCAGGTTACCCTTTTTCCTGGTTCTGGTTTTTCCATCGGAATAACCACACACCATGCAGCCACGGATGGAAAAGCCACAACTTTGTTTCTCAAAGCATGGGCCTTTGTTTGCTCCAATAACTTCACAGAATCGTCGTTTTCGTCGTTGCCAAAACACCTCACGCCCTTCTATGACAGGTCAATGATAAAGGACACCAAAGGAATCGGTGCGATGTATTTGAATAGTTGGTTGAACATCGGTGGACCAAACAATAGGAGCATGAAAGTGTGGGATCTTGGAGGTGTAAATGCAATGTCAGCCGAATCAGTCAGAGGGTCGTTCGAGTTAACCTCTTCAAACATCCGACAGCTGAAGCAACATGCAAATTCTAAGCTTGACGAGAATGCTCATGTGTCAACATATTCGGTTGCTTGTGCTTATGTGTTGCAGTGTTTGGTGAAGGCAGAACAACCTAAGACGGATGGAGTGGCGTTTTTGTTCAGTGTGGACTGTAGGACTCGTATGGAGACACCCATTTCCTCCACGTATTTTGGAAACTGCATCATTGGTCAGAAGGTTATGGGTGGAACAAAGAAGTTGTTGGGAGATGATGGTTTCATCAATGGTGTTGAAGGGATGAATGAAGCTTTGAAGAAGTTGGAGGATGGAGTGTTTAGTGAGGCAGTGACTTTGTCTACAATGATGAAAATTGCGAGAGATAATCGAATACTTACAACTGCAGGGTCACCACGATTTGAGGTATATAGTATTGATTTTGGATGGGGAAAGCCAATGAAGGTGGATATGACATCCATAGGCAAAAGTGGAGCATTCTGCATTTCTGAAAGTAGGAATGAGAATGGAGGAGTTGAGATTAGTTTGGTGTTGAACAAGCAACAAATGGAAACTTTCGTTTGTCATTTTAATCAAGGTCTTCAATCCCTTTAA 1446 0.4398 MKPFKSLYIRKRFCRSITKFLAMEEARSLKVVEVCSVAPSEAAAATTNCSTPTSLSLTFFDLLWLRSPPVERVFFYQLPNTTISFFDTILPNLKLSLSLTLQHFLPLAGTITWPLESPHPIINYVPGDAVSFTIAESTTDFNMLCSNTCQASLLHHLIPHLPTSDEQASVMALQVTLFPGSGFSIGITTHHAATDGKATTLFLKAWAFVCSNNFTESSFSSLPKHLTPFYDRSMIKDTKGIGAMYLNSWLNIGGPNNRSMKVWDLGGVNAMSAESVRGSFELTSSNIRQLKQHANSKLDENAHVSTYSVACAYVLQCLVKAEQPKTDGVAFLFSVDCRTRMETPISSTYFGNCIIGQKVMGGTKKLLGDDGFINGVEGMNEALKKLEDGVFSEAVTLSTMMKIARDNRILTTAGSPRFEVYSIDFGWGKPMKVDMTSIGKSGAFCISESRNENGGVEISLVLNKQQMETFVCHFNQGLQSL* 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra1g0972 481 Pfam Transferase family 52 474 - -
Vra1g0972 481 PANTHER - 25 481 - -
Vra1g0972 481 PANTHER MALONYL-COA:ISOFLAVONE 7-O-GLUCOSIDE MALONYLTRANSFERASE 25 481 - -
Vra1g0972 481 Gene3D - 28 260 IPR023213 -
Vra1g0972 481 SUPERFAMILY CoA-dependent acyltransferases 279 480 - -
Vra1g0972 481 Gene3D - 271 481 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra1g0972 Vra-Chr1 11576132 11577741 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra1g0972 73 470 Monolignol Biosynthesis Gene Families AT5G48930 23.741 8.70e-18 83.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra1g0972 - - vra:106767538 954.51