Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra1g0970 ATGTCTAAAAAGGTCTTCACATCGATGAAGGATGAAAATCCAGAGTTGCAGAAGCAAATTGGGTGCATCAGTGGCTTTTTTCAGCTTTTTGACCGCCACAGGTTCCTCACAGGCCAACAAGGTAGCAGCCACAATCAGAACATACAAACTAAAGGTGGAACAAGGAACCAGGTGAAAGAGGTAAATAATAAAACTCAAAAGTCAACGGGAAAGAATGTGAAGATTGCAGGAGAGAATCAGCAATTCTCCACAGAATCATCAGGAACTTCCATGTCTTCATCTTCTCGTTCATCTAGCATGTCATCCCTTGAGTTCAACAGAGCAATTCAGATAGAACCACCATCAATAATCAGTCCAATGAAAATTCCAGAGAACTCTAATCCAGAAATAGAAGTGAAGCAACATGGCAACCAGGACCCTCAGTCACTTGATTTCTATGACATTGTGAAGGATTCAATGCATAGAGATGTTCAAGGATTGTCTGTAAAGATTGTGGCTAAAGAGGAAAAGAAAGGTAGAATCTTGAAACACGTTGACTCTCCCAGGCCTTTGGAACCCCCAAAACCTGTAAATATGGTTGCTTGGGATTCACCGAGACTCTCTTATGATGGGAGGGACACACAAGATTCATTAAAATCTGCTACAAAACCTAAGGAACTCCCCAGGCTTTCCTTGGACAGCAGAGAAGGATCCATCAAAAGCTTCAATGAAGGAACAAAATGTCGTGGCCTTCTGAAGGGTCTACAGAAAGGGTATGGTAGCTCTGGCACAATGCTTAAGCAGCTGCAGGAACCAGAAACTTCTAGAAGATCATCCAGTGTTGTAGCAAGGTTGATGGGACTAGAAACCTTCCCAGACTGTACAGAAGCCTGTGATACTCAACCACGGATCTGTACCAGCAAAAATGAGTCAAACGCAGAACCTTGCACAAATCATGAGCAACACCAGAGTGCAGCATCAATGAAAAGGTCTACCTTTCTTCAGTTTAGGAGGGATGCTTCAATCCTGAATGTGACACCCTATTCACGGTTTTCCCTAGAATCTGAAGCTAGCCAAGGTTCTCAAATACAGACTCCAAAGAGAAGTGAATCTTCAGCAAAAGCATCAAACCAATCACTTTCTGTATACGGAGAGATTGAAAAGAGGATAGCAGATATAGAGTTCAAAAACTCTGGAAAGGATCTCAGGGCGCTTAAACAGATTCTTGATGCAATGCAGAGATATAAAGAATCATTTGAGATAACAAGGGACCAGGCTTCAAATTCTCTATCTGACAATAGGAGTAATAGCAGTCTCAGTGAAAACTCTGTGGTTAAAAGCCCAAGAATACGGCAGAAGGACCCAGCATCCACCACTTCTGAGATGAGAAATTCAACCCAGGGTAGTAAGTCACCAATTTTCACCATGAAACCAGCAAAATCTGCAAGAGAAACTGGCAAGTTTGGTTCTGCTAATCCTGCAAATGGAATAGTGGGAGAGAAGATTGACAGGAAAACAGCAAAAGGTATCAGTCCAGCAATCAGACAGGCCAAGGATTCCATTGGCCAACCCTTCCACTCAGTGGATAAGAGCAACAACAAGATAAGAACATCAAAATTGTTGCAATCCCCTAAAGTTCCTCAAGTAATCAATGGGGAAAACGCCACCAACTCCAGCAATACAACAGGGGCCAAGAGTCCAAGGCTACAAAAGAAGTTTGGTTTGGAGAGGCGCTCACCAACTACTATCCCATCATCAGAATCATGCAGTAACAGAAGACAACATAATAGGCAATCAGTGGAATTGTCTTCCCCAAGTACTACACCCAGACAAAGATTCAATGAGACAAAAAACCAAAGGGAGGATTTTAAGCAAGAAGTTGGAGTAGAAGTCATTCACATCGATCAAAGTAATGCAACAAAAGATTTGAGCAAGGAAAGCTTTCAAGTTGAGAAAATAATTACGGCAGAGCAACCAAGCCCCGTGTCTGTTCTTGATGCTTCTTTCTACAATGAAGAACCACCTTCACCGGTCAAAAAGAAATCAGACATCACAAGAGATTTAGATGATACTCTTTATGATAGCAGTGAGGAGAACTCAGAAGATCTCCCGCTTTTATCCAACAATGCAAAAGCCAACTTCAGCAGTAGAACTCAAAATTTGGTTCAAATTCTCCACCAAATTGATTCCAATGATGAGAGATTTACCAATTTCAGAGACTATAATGATCCTGACCATAAATATATATCAGAAATACTGTTAGCATCAGGGCTTCTCAGCAGTCCAAGCTCTAGCTACGATTTTCATTCATCAAGTCACCCTATAAACCCAAAGTTGTTCCTTGCTCTAGAGCAAATCAAGACAAACAAGAACTGTTTCAACATTGAATACAATGCCAAGAAAATTGCTGGGCTTAGTAGTCCTCAGAAAATGCAAAGAAAGCTAATATTTGATGTTGTTAGTGACATTCTAGCTCAGAAACTGATATTGGAAAGTTCTACTCCGTGGTGCCAGTCGAATCAGCCAATAAGTAGAAAAATAAGAGGGAAGCTGCTGTTGGATGAGCTTTGCACAGAAATTGATAAGTTGCAACCTAAAAATAGGAATGAGAAACTGATTAACGAGGATGAGAACATGACAAGCCTCGTGTGGGAAGAGTTGATGCACTATCCCTCAATTTACACAAACAGTTACATGGAAATTCCAAATGTTGTGTTGGATGTTGAACGGTTGATCTTCAAAGATTTGATAACTGAAGTTGTGAGAAGTGAACTTCCTAACCATGCTAAGCACTGCAGACAACAGCTATTTTCCAAGTAG 2799 0.4116 MSKKVFTSMKDENPELQKQIGCISGFFQLFDRHRFLTGQQGSSHNQNIQTKGGTRNQVKEVNNKTQKSTGKNVKIAGENQQFSTESSGTSMSSSSRSSSMSSLEFNRAIQIEPPSIISPMKIPENSNPEIEVKQHGNQDPQSLDFYDIVKDSMHRDVQGLSVKIVAKEEKKGRILKHVDSPRPLEPPKPVNMVAWDSPRLSYDGRDTQDSLKSATKPKELPRLSLDSREGSIKSFNEGTKCRGLLKGLQKGYGSSGTMLKQLQEPETSRRSSSVVARLMGLETFPDCTEACDTQPRICTSKNESNAEPCTNHEQHQSAASMKRSTFLQFRRDASILNVTPYSRFSLESEASQGSQIQTPKRSESSAKASNQSLSVYGEIEKRIADIEFKNSGKDLRALKQILDAMQRYKESFEITRDQASNSLSDNRSNSSLSENSVVKSPRIRQKDPASTTSEMRNSTQGSKSPIFTMKPAKSARETGKFGSANPANGIVGEKIDRKTAKGISPAIRQAKDSIGQPFHSVDKSNNKIRTSKLLQSPKVPQVINGENATNSSNTTGAKSPRLQKKFGLERRSPTTIPSSESCSNRRQHNRQSVELSSPSTTPRQRFNETKNQREDFKQEVGVEVIHIDQSNATKDLSKESFQVEKIITAEQPSPVSVLDASFYNEEPPSPVKKKSDITRDLDDTLYDSSEENSEDLPLLSNNAKANFSSRTQNLVQILHQIDSNDERFTNFRDYNDPDHKYISEILLASGLLSSPSSSYDFHSSSHPINPKLFLALEQIKTNKNCFNIEYNAKKIAGLSSPQKMQRKLIFDVVSDILAQKLILESSTPWCQSNQPISRKIRGKLLLDELCTEIDKLQPKNRNEKLINEDENMTSLVWEELMHYPSIYTNSYMEIPNVVLDVERLIFKDLITEVVRSELPNHAKHCRQQLFSK* 933
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra1g0970 932 MobiDBLite consensus disorder prediction 572 606 - -
Vra1g0970 932 Pfam Domain of unknown function (DUF4378) 738 912 IPR025486 -
Vra1g0970 932 PANTHER LONGIFOLIA PROTEIN 1 931 IPR033334 GO:0051513
Vra1g0970 932 MobiDBLite consensus disorder prediction 418 467 - -
Vra1g0970 932 MobiDBLite consensus disorder prediction 198 217 - -
Vra1g0970 932 PANTHER LONGIFOLIA PROTEIN 1 931 - -
Vra1g0970 932 MobiDBLite consensus disorder prediction 418 493 - -
Vra1g0970 932 MobiDBLite consensus disorder prediction 38 103 - -
Vra1g0970 932 MobiDBLite consensus disorder prediction 518 560 - -
Vra1g0970 932 MobiDBLite consensus disorder prediction 202 217 - -
Vra1g0970 932 MobiDBLite consensus disorder prediction 509 617 - -
Vra1g0970 932 MobiDBLite consensus disorder prediction 347 371 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra1g0970 Vra-Chr1 11544485 11549663 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra1g0970 1 925 TRM (TON1 Recruiting Motif) Superfamily AT5G15580 29.672 5.61e-71 251
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra1g0970 - - vra:106774015 1766.13