Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra1g0930 ATGATGTCCCTCTTCTCTTTCTCCCATTACAAATTCCTTTGGAGATGTTCAATTGCATTTGCATTTTTCTTAACCCTTTTCTTCATTGCAAACTCACTCACTCTCCAAGCCCAATCCACTTCAACCCCATGCAACAAAAACCCCTACAGCCAACTCAATCTAATCCTTAACCAAAACGGCACCGTCACACGCCCCGACAAACCCCCCGACAGCCCGCCCGCAGCCGATCCCACTCTCCTCGTACTCTCCAAAGACCTCTCCATCAACCCATCCAAGGGCACCTGGGCGAGGCTGTACCTGCCCCGCGCAGCACAGCATCAACGCTCTAAGCTCCCCCTGCTGCTTTTCTTCCATGGTGGAGGGTTCATTTTCCTCAGTGCAGCCTCAACGATCTTCCACGAGTTTTGCTTCAACATGGCAAACGACGTCGTCGCGGTAGTAGTATCCCTGGAGTACCGTCTCGCACCGGAACATAGACTCCCCGCGGCGTACGATGATGCCGTGGAGGCGCTGCGGTGGATAAAAGCCAGCCAGGATGATTGGCTTAAAAACCTCGTCGATTACTCCAATGTTTTTCTCATGGGGAGTAGTGCCGGGGGAAATATCGCCTACAACGCCGGTCTACGTGCAGCTGCGGCTGCCGACTATCAGATTCCCAAGATCAAAGGGCTTATTTTGGTTCAACCTTTTTTCAGTGGGACCCGCAGGACAGGTTCGGAGCGGAGGCTGGCGAACGAACCTCATTTGGGGCAGTGCTTTAATTACGCGATGTGGGAGTTGTCGTTACCGGTTGGGGTTGACCGTGATCACGAGTATTGCAATCCGACGGCGGGGAACGGTCCTGCGAGATTGGAATTGATCGAAAGGGTTGGATGGTGGGTACTGGTTACCGGGTGTGGAGGTGACCCACTGGTGGATCGTCAGGTGCAGCTGGTTAAGTTGATGAAAAAGAAGGGTGTGAAAGTTGTGGGGCATTTCACCCCAGGGGATTATCATGGGATTCAAGATACTGATCCATTGAAGGCAAAGGAGCTATACAGAGTAATCAAAACTTTCATTTCAGCTTTGAATTATGCTCAAGAGTAA 1086 0.5166 MMSLFSFSHYKFLWRCSIAFAFFLTLFFIANSLTLQAQSTSTPCNKNPYSQLNLILNQNGTVTRPDKPPDSPPAADPTLLVLSKDLSINPSKGTWARLYLPRAAQHQRSKLPLLLFFHGGGFIFLSAASTIFHEFCFNMANDVVAVVVSLEYRLAPEHRLPAAYDDAVEALRWIKASQDDWLKNLVDYSNVFLMGSSAGGNIAYNAGLRAAAAADYQIPKIKGLILVQPFFSGTRRTGSERRLANEPHLGQCFNYAMWELSLPVGVDRDHEYCNPTAGNGPARLELIERVGWWVLVTGCGGDPLVDRQVQLVKLMKKKGVKVVGHFTPGDYHGIQDTDPLKAKELYRVIKTFISALNYAQE* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra1g0930 361 PANTHER CARBOXYLESTERASE 120-RELATED 42 355 - -
Vra1g0930 361 Pfam alpha/beta hydrolase fold 114 334 IPR013094 GO:0016787
Vra1g0930 361 PANTHER ARYLACETAMIDE DEACETYLASE 42 355 - -
Vra1g0930 361 SUPERFAMILY alpha/beta-Hydrolases 66 358 IPR029058 -
Vra1g0930 361 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 114 130 IPR002168 GO:0016787
Vra1g0930 361 Gene3D alpha/beta hydrolase 49 357 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra1g0930 Vra-Chr1 10850556 10851810 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra1g0930 58 338 Carbohydrate Esterase AT5G16080 38.014 4.98e-54 179
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra1g0930 - - gmx:100792597 531.946
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra1g0930 1 10850556 10851810 Vra1g0930 1 10850556 10851810 ECH
Vra1g0930 1 10850556 10851810 Vra8g2295 8 41217076 41218269 PCT
Vra8g2294 8 41214686 41216102 Vra1g0930 1 10850556 10851810 PCT