Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra1g0923 ATGGCCAAGACCATAATGGGAAACATGGGTTATTTTCTTACAAGCTATCTTCTAGTTCTAACAATGTTGTTCTCAGCAAATGCTCAATTTGTTAAGAAGACTTACCTCGTTCAAATGGATAAGGCAGTAATGCCAAAGGCCTTCACCAACCACCTTGAATGGTATTCATCAAAGCTGAAATCGGCACTGTCCACATCTCCAGAAGCTGATGCGGAGAGTGAGAAGAGAATTATCTACACTTACCAGAATGCTTTTCATGGTGTTGCAGCTAAGTTGACTGAAGGAGAAGCTAAGAAGCTAGAGGCTGAAGAAGGAGTTGTGGCCATATTCCCAGATACAAAGTATGAGCTACACACCACAAGAAGTCCTGCATTCCTCGGGCTTCAACCAGAAAAAGCCCCTAACATGTGGTCAGAAAAGCTTTCTGGCCGAGATGTTATAGTGGGAGTGTTAGACACTGGGATTTGGCCAGAGAGTGAAAGCTTCAAAGATGTAAGCATGGGACCAGTACCTGCTCATTGGAAAGGTGCCTGTGAGATTGGAACAGGATTCACAAAAAGTCACTGCAATAAAAAGGTTGTGGGGGCAAGAGTGTTCTACCATGGATATGAAGCAGCAATTGGTAGAATTAATGAGCAGAAGGAGTACAAATCACCAAGAGATCAAGATGGGCATGGCACCCACACAGCAGCTACAGTTGGTGGCTCTCCTGTGCTTGGGGCTAACCTTCTTGGTTATGCTAATGGCACAGCAAGAGGAATGGCACCAGGTGCAAGGATTGCAGCTTACAAAGTGTGTTGGGTTGGTGGGTGCTTCAGCTCAGATATTGTGTCAGCTATTGATAAAGCTGTGGCTGATGGAGTGGATATTCTTTCCATCTCTTTGGGTGGTGGAGTCTCCTCTTATTACCGTGATAGTTTATCTGTTGCTGCATTTGGAGCAATGGAGAAGGGTGTTTTTGTTTCATGTTCTGCAGGAAATGCAGGACCTGATCCTGCCAGCCTCACCAATGTTTCACCATGGATCACCACAGTTGGAGCCAGCACAATGGATAGAGATTTTCCAGCAGAAGTTAAGCTTGGAAATGGTAAGATAGTGACTGGAGTTTCACTCTACAAAGGGCAAAGTGTGCTTTCAATTGAGAAACAATACCCTTTGGTGTACTTGGGGAGCAACTCTAGCAGGGTTGATCCAAGATCCATGTGCTTGGAAGGGACTATGGATCCTAAAGTGGTTTCAGGAAAGATAGTTATATGTGATAGAGGCCTTAGTCCTAGAGTGCAGAAGGGTAATGTGGTGAGAAGTGCAGGCGGGGTGGGAATGATTCTCACAAATACTGAAGCTAATGGAGAAGAACTAGTTGCTGATTGCCATCTCCTTCCAGCAGTTGCAATAGGAGAAAAAGAAGGAAAAGATCTCAAAAGTTATGTACTATCTGGTAAAAGTGCTACTGCAACTCTAGCTTTTAAAGGTACGAGGTTGGGAATAAGGCCATCTCCTGTAGTGGCAGCATTTTCATCAAGAGGGCCAAATTTTCTCAGCCTTGAAATTCTGAAGCCTGATTTAGTGGCTCCTGGGGTGAACATTCTTGCTGCTTGGAGTGAGGCCATTGGTCCCTCAGGTTTGAAAGTGGACAACAGAAGAGAGAAGTTCAATATACTCTCTGGAACCTCAATGTCATGCCCACATGTGAGTGGTGTAGCAGCCTTTCTCAAAGCCAGGCACCCTGAGTGGAGCCCTGCTGCTATAAAATCTGCTTTGATGACGACTGCTTATGTTCTTGACAACACCAAAAAAACTCTCACAGATGCCTCAACTGCTAAACCTTCAAGTCCTTATGATCATGGTTCTGGACACATTGACCCAATTAGAGCTGTTGACCCTGGTTTGGTATATGACATAGAGCCACAGGACTACTTTGAATTCCTATGCACACAGAATCTGACTCCAACCCAACTACAAGTTTTTGCCAAATTTTCCAACAGATCTTGCAAACACTCTCTTGCCAGTCCAGGGGACTTGAACTACCCAGCCATTTCATCAATCTTTACCCAGAAAACAGCCACTTCATTCTCTAGACCTGTGATTGTTCACAGAACTGTCACCAATGTTGGCCCAGCTGATTCCAAATACCAAGTTGTGATCTCACCATTCGAAGGTGCTTCTGTCAAAGTTGAGCCAGAAACTCTAAATTTCACAAAAGAACACCAAAAGCTGTCTTACAAGATTACATTCACGCCAAGGGTTCGGCAAACATCTCCTGAATTTGGAAGTCTGGTATGGAAGGATGGTTTGCACACTGTGAGAAGCCCCATTGTGATAACATGGCTGGCACCACCAATGTGA 2346 0.4463 MAKTIMGNMGYFLTSYLLVLTMLFSANAQFVKKTYLVQMDKAVMPKAFTNHLEWYSSKLKSALSTSPEADAESEKRIIYTYQNAFHGVAAKLTEGEAKKLEAEEGVVAIFPDTKYELHTTRSPAFLGLQPEKAPNMWSEKLSGRDVIVGVLDTGIWPESESFKDVSMGPVPAHWKGACEIGTGFTKSHCNKKVVGARVFYHGYEAAIGRINEQKEYKSPRDQDGHGTHTAATVGGSPVLGANLLGYANGTARGMAPGARIAAYKVCWVGGCFSSDIVSAIDKAVADGVDILSISLGGGVSSYYRDSLSVAAFGAMEKGVFVSCSAGNAGPDPASLTNVSPWITTVGASTMDRDFPAEVKLGNGKIVTGVSLYKGQSVLSIEKQYPLVYLGSNSSRVDPRSMCLEGTMDPKVVSGKIVICDRGLSPRVQKGNVVRSAGGVGMILTNTEANGEELVADCHLLPAVAIGEKEGKDLKSYVLSGKSATATLAFKGTRLGIRPSPVVAAFSSRGPNFLSLEILKPDLVAPGVNILAAWSEAIGPSGLKVDNRREKFNILSGTSMSCPHVSGVAAFLKARHPEWSPAAIKSALMTTAYVLDNTKKTLTDASTAKPSSPYDHGSGHIDPIRAVDPGLVYDIEPQDYFEFLCTQNLTPTQLQVFAKFSNRSCKHSLASPGDLNYPAISSIFTQKTATSFSRPVIVHRTVTNVGPADSKYQVVISPFEGASVKVEPETLNFTKEHQKLSYKITFTPRVRQTSPEFGSLVWKDGLHTVRSPIVITWLAPPM* 782
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra1g0923 781 Pfam Peptidase inhibitor I9 34 118 IPR010259 -
Vra1g0923 781 ProSitePatterns Serine proteases, subtilase family, serine active site. 556 566 IPR023828 -
Vra1g0923 781 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 23 118 IPR037045 -
Vra1g0923 781 Pfam Subtilase family 143 599 IPR000209 GO:0006508|GO:0008236
Vra1g0923 781 SUPERFAMILY Subtilisin-like 117 630 IPR036852 GO:0004252|GO:0006508
Vra1g0923 781 PRINTS Subtilisin serine protease family (S8) signature 143 162 IPR015500 -
Vra1g0923 781 PRINTS Subtilisin serine protease family (S8) signature 221 234 IPR015500 -
Vra1g0923 781 PRINTS Subtilisin serine protease family (S8) signature 555 571 IPR015500 -
Vra1g0923 781 CDD PA_subtilisin_like 358 487 - -
Vra1g0923 781 Gene3D - 351 495 - -
Vra1g0923 781 ProSiteProfiles Serine proteases, subtilase domain profile. 114 626 - -
Vra1g0923 781 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 24 774 IPR045051 -
Vra1g0923 781 CDD Peptidases_S8_3 115 592 IPR034197 -
Vra1g0923 781 Pfam Fibronectin type-III domain 673 774 IPR041469 -
Vra1g0923 781 PANTHER XYLEM SERINE PROTEINASE 1 24 774 - -
Vra1g0923 781 Gene3D - 643 777 - -
Vra1g0923 781 Gene3D Peptidase S8/S53 domain 145 639 IPR036852 GO:0004252|GO:0006508
Vra1g0923 781 Pfam PA domain 383 473 IPR003137 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra1g0923 Vra-Chr1 10742385 10745351 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra1g0923 11 779 Subtilisin-like Serine Gene Family AT5G51750 67.792 0.0 1100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra1g0923 - - gmx:100794709 1411.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra8g2300 8 41261934 41264740 Vra1g0923 1 10742385 10745351 ECH
Vra1g0923 1 10742385 10745351 Vra1g0923 1 10742385 10745351 ECH
Vra1g0923 1 10742385 10745351 Vra8g2300 8 41261934 41264740 PCT