Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra1g0922 ATGAGATTCTTGGAATTTCATTGTGATCCAATGTCTGCAATTGCAACCTTTGCAGCTATAGCTTTAACAGTCTTTCTCATATTCAGAAGTTTCATCTGCAAGAAAGGAAGGTACCATGCGGTCGCGGGAACTATGTTAGACCTGTTGCTCAACTTCCGCAATCTGCACGATTACATGACTGATATTGCCAGAAAACACAAGAGCTACCGGTTGCTTTGGTTTCTCAGGAGTGAAATTTACACTGTGGACCCTGTCAATGTTGAATACATCCTCAAAACAAACTTTGCAAACTATGAGAAGGGCTGGTACCACTATGAGAAATTGACAGATCTTTTAGGTGACGGAATATTCTCAGTGGACGGCGAGAAGTGGCTACACCAGAGAAAGGTTGCGAGCTATGAAATTGGCACCAAAATAGTGAGAGATTTTAGCCTTGAAGTGTTCAAATCCAATGCAGTAAAACTTGCAGGAGTTGTTTCAAAAACAGCCATGTCAAATAATGCAGTTGACTACCAAGAACTGTTTATGAAATCAACCTTAGACTCGGTCTTTAAGATTGTCCTTGGAGTAGACTTGGACACCATATACGGAACATACGAAGAAGGCACTCGATTCTCCAATGCCTTTGACGAAGCAAGTGCTATAACGTTGTATCGCTATGTCGATGTTTTATGGAAGATCAAGCGTTTTCTCAACATTGGATCAGAGGCAGTACTCAGAAACCGCATTAAAGAGGTGGATGATTTTGTTTACAAACTAATCAGAACGAAGACAGAGCAAGTGCAGAAGTCATCACAATCTGATTTTCCTGAGAAAAAAGCAGATATGGTGTCAAGGTTTCTGGCATTGAATGAGACAGATCCTAAGTACCTAAGAGACATTATTCTCAGCTTCGTGATTGCAGGAAGAGATACAACAGCTGCTACTCTTTCCTGGTTCTTTTACATGCTATGCAAGCATCCTCATATCCAAGAAAAAGTTGTGCATGAAGTTGGAGAAGTAACAAAGTTGAAGAACACTTGTAGTATTGATGAACTTGCAGATAGCCTAACAGATGAGGCCCTGGGAAAAATGCACTATTTGCATGCAGCTTTAACTGAAACACTCAGACTTTACCCTGCCGTTCCAATTGATGGAAAACTTTGCTCATCTGATGAAACTTTACCTGATGGATTTAGAATTAGGAAAGGTGATTCTATATCATATCAGTCATATTCCATGGGTAGGATGGAATTCATATGGGGTGAAGATGCAGAGGAATTTCGACCAGAGAGATGGCTTGATGAAAGTGGAACTTTTCAAGCAGAGAGTCCTTTCAAGTTCACAGCTTTTCAGGGCGGTCCAAGAATTTGTCTGGGGAAAGATTTTGCATACAGGCAGATGAAAACCTTTGCTGCTGTTCTTTGTCACAGCTACAAGTTCAAGCTGGCTGTCCAAAATGAATCGGTGAATTATAAGACTATGCTCACTCTTCACATTGATGGTGGTCTTCATCTGCATGCTTCTCACAGATTCGAGCTTATGGGTTAG 1530 0.4098 MRFLEFHCDPMSAIATFAAIALTVFLIFRSFICKKGRYHAVAGTMLDLLLNFRNLHDYMTDIARKHKSYRLLWFLRSEIYTVDPVNVEYILKTNFANYEKGWYHYEKLTDLLGDGIFSVDGEKWLHQRKVASYEIGTKIVRDFSLEVFKSNAVKLAGVVSKTAMSNNAVDYQELFMKSTLDSVFKIVLGVDLDTIYGTYEEGTRFSNAFDEASAITLYRYVDVLWKIKRFLNIGSEAVLRNRIKEVDDFVYKLIRTKTEQVQKSSQSDFPEKKADMVSRFLALNETDPKYLRDIILSFVIAGRDTTAATLSWFFYMLCKHPHIQEKVVHEVGEVTKLKNTCSIDELADSLTDEALGKMHYLHAALTETLRLYPAVPIDGKLCSSDETLPDGFRIRKGDSISYQSYSMGRMEFIWGEDAEEFRPERWLDESGTFQAESPFKFTAFQGGPRICLGKDFAYRQMKTFAAVLCHSYKFKLAVQNESVNYKTMLTLHIDGGLHLHASHRFELMG* 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra1g0922 509 Pfam Cytochrome P450 44 492 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra1g0922 509 Gene3D Cytochrome P450 38 506 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra1g0922 509 PRINTS E-class P450 group I signature 290 307 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra1g0922 509 PRINTS E-class P450 group I signature 310 336 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra1g0922 509 PRINTS E-class P450 group I signature 362 380 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra1g0922 509 PRINTS E-class P450 group I signature 404 428 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra1g0922 509 PRINTS E-class P450 group I signature 441 451 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra1g0922 509 PRINTS E-class P450 group I signature 451 474 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra1g0922 509 PANTHER CYTOCHROME P450 13 506 - -
Vra1g0922 509 PANTHER - 13 506 - -
Vra1g0922 509 SUPERFAMILY Cytochrome P450 39 504 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra1g0922 509 PRINTS P450 superfamily signature 301 318 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra1g0922 509 PRINTS P450 superfamily signature 363 374 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra1g0922 509 PRINTS P450 superfamily signature 442 451 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra1g0922 509 PRINTS P450 superfamily signature 451 462 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra1g0922 Vra-Chr1 10735085 10738011 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra1g0922 13 504 Cytochrome P450 AT2G45510 52.894 0.0 530
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra1g0922 - - twl:119985375 677.167