Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra1g0914 ATGACGACGGCGACTCTCGGCCCGAAGGAGCGGCGGGCTTTTGGGCTCTGGTGCTGCGTTGTGTGCCTCGCGATCTGCGCTAGGGTTTGCAGCGCGGCCAGATCGGACAAGGAAACGCGCGAGAGGTTCTACGGAAACATAGCCAATTTGACGTCGCCCGAATCCAACAACACCTTGGCCAAGATGTTCGATCGCGTTCTCGAGAAGGAGTTTTCTGAGAATGACCAACCAGAAGAATCTGACAAAAGCAGCTTCAATAGCAGTGTAGCAGATCAGCAGGCTGTATTGGAGACTGTAGCTAAAATTACTCACGAGAAATCAAAGAGAAATGATACACATGAGGGAAATGCTACGAGAGCATTTCAGTTTCAGGATGTGTTCTCACTGGAAAATGAAGATTCCGATGATGTGACAACTTTGATTGATAAAAAGGACAATGTGTTCGTTATGTCTAACAAGAAATCCAAATATCCTGTGCTTCAAGTGGATTTGAGGCTAATATCAGATTTGGTGGTTGTAATAGTTTCAGCAGCCATTGCTGGGATTGTCTTTTCTTGTTTGGGACAACCGGTTATCGTGGGCTATCTTCTTGCAGGCTCACTTATTGGACCTGGCGGTTTGAAATTTATCAGTGAAATGGTGCAGGTTGAGACTGTTGCACAATTTGGTGTAGTGTTTCTTCTCTTTGCTTTAGGGCTGGAATTTTCCCTGGCAAAGTTAAAAGCTGTGGGGGCTGTTGCTGTTCTTGGAGGACTACTTCAAATTGTCATTTTTATGTTCATGTGTGGCATTCTTTCCATGTTATTTGGAGCCTCATTGTCTGAAGGTGTTTTTGTGGGTTCCTTTCTGTCCATGTCATCAACAGCAGTAGTGGTGAAGTTTTTGGTGGAGCGAAATAGTAGTAATGCTCTTCATGTTCAAATTACAATTGGGACTCTTATTTTTCAGGATTGTGCAGTGGGTTTACTATTTGCTTTGCTCCCAGTTTTGGGTGGTAACAGTGGCCTTTTACAAGGAATAATGTCAATGGGGAGACTGCTGCTAGTGTTGTCTTTGTACATCACTGCTACATCCATATTGTCATGGTCATTTGTTCCTCGGTTTCTTAAACTGATGATGCGGCTGTCATCTCAGACTAATGAACTTTATCAGCTAGCTGCTGTTGCTTTCTGCTTGTTATCTGCATGGTGCAGTGATAAGCTAGGCCTTAGTCTTGAGCTGGGTTCATTTATGGCTGGTGTTATGATTTCCACAACAGACTTCGGTCAACATACTTTGGACCAGGTGGAACCAATTCGTAACCTATTTGCAGCTCTCTTTCTCTCGAGTATTGGAATGCTTATACACGTGCATTTCCTTTGGAACCATGTGGATATCCTGCTGGCATCTGTTATTCTGGTTGTAGTTGTTAAAACTGCTGTTGTTGCTATAGTCACCAAGGCCTTTGGTTATAGCCTTAAGACGGCATTTATTGTTGGTATCTCGCTTGCCCAAATAGGTGAATTTGCTTTTGTCCTCCTGAGTCGTGCTTCAAATCTTCACCTTGTTGAGGGGAAAATGTATCTTCTTCTTCTAGGGACAACGGCTCTCAGTCTGGTCACAACTCCACTTTTGTTTAAATTGATACCTGCTGTCATGAATCTGGGTGTTCTCATGCACTGGTTCCCCTCTGAAAGTACAACACAAATTGAGGGGAAAGTATCTGTGAATGAAGCAAGCAGAATGTTATGA 1731 0.4373 MTTATLGPKERRAFGLWCCVVCLAICARVCSAARSDKETRERFYGNIANLTSPESNNTLAKMFDRVLEKEFSENDQPEESDKSSFNSSVADQQAVLETVAKITHEKSKRNDTHEGNATRAFQFQDVFSLENEDSDDVTTLIDKKDNVFVMSNKKSKYPVLQVDLRLISDLVVVIVSAAIAGIVFSCLGQPVIVGYLLAGSLIGPGGLKFISEMVQVETVAQFGVVFLLFALGLEFSLAKLKAVGAVAVLGGLLQIVIFMFMCGILSMLFGASLSEGVFVGSFLSMSSTAVVVKFLVERNSSNALHVQITIGTLIFQDCAVGLLFALLPVLGGNSGLLQGIMSMGRLLLVLSLYITATSILSWSFVPRFLKLMMRLSSQTNELYQLAAVAFCLLSAWCSDKLGLSLELGSFMAGVMISTTDFGQHTLDQVEPIRNLFAALFLSSIGMLIHVHFLWNHVDILLASVILVVVVKTAVVAIVTKAFGYSLKTAFIVGISLAQIGEFAFVLLSRASNLHLVEGKMYLLLLGTTALSLVTTPLLFKLIPAVMNLGVLMHWFPSESTTQIEGKVSVNEASRML* 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra1g0914 576 Gene3D - 164 547 IPR038770 -
Vra1g0914 576 PANTHER POTASSIUM/PROTON ANTIPORTER-RELATED 34 567 IPR045158 GO:0015386|GO:0071805|GO:1902600
Vra1g0914 576 PANTHER K(+) EFFLUX ANTIPORTER 6 34 567 - -
Vra1g0914 576 Pfam Sodium/hydrogen exchanger family 171 540 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra1g0914 Vra-Chr1 10651099 10661135 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra1g0914 33 571 Antiporters AT5G51710 81.111 0.0 895
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra1g0914 - - gmx:100799476 962.214
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra1g0914 1 10651099 10661135 Vra1g0914 1 10651099 10661135 ECH