Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra1g0857 ATGACTTCTCAAACCCCAAAATCAAAGCTTGTTCTGCCACTCAGAACCCGAGCTGCGTTGTCCGTTCTCTCCGCCTTAACGGATTTCTCCCGTCGATCCGACGGCACCGTTAAACGCGGTTTCCTGAAAATCCTCGATATTAAGAGCCCATGCAAAGCCAAATCCGTTAACGGCGTTTCTACTAAAGACGTCACTGTTGACAAGTACAGAAAACTCTGGATTCGTGTCTACACTCCCACATCCTCCTCTGGTGACGGAGTTCTTCCCGTCGTCATTTTCTTCCACGGCGGCGGCTTCACTTTCCTCTCGGCGGACTCCTTTGCTTATGACGCTGTGTGCCGGCAATTCTGCCGCCGAACCCCTGCCGTTGTTGTCTCCGTGAACTATCGCCCCACGCCGGAGCACCGGTTCCCTTGTCAATACGACGACGGCGAGGACGTCCTCAAGTTCCTTGCCGGAAATCCCTCGGTGCTGCCGGAAAATGCTGACTTGAAAAAGTGCTTCCTCGCCGGTGACAGCGCCGGCGCGAATTTGGCTCACCACGTGGCAATTCGGGTCGCGAAGTCGGGGCTCCGTGGAGTTCGGCTGGTGGGGTTGGTTTCCATTCAGCCGTGGTTTGGAGGGGAGGAGCGTACTGATTCGGAGCTGAAATATAAGGATGCACCGCTGGTTTCGATATCAAGAACCGATTGGCTGTGGAAGGCGTTTTTGCCGGAGGGATCAGATCGCGACCACTGGGCGGTAAATGTGAGCGGAGCGAATTCGGAGGATTTGTCGGGTCTGGATTACCCGAATACCCTTGTGATTGTGGGTGGATTTGACCCGTTACAAGATTGGCAAAGAAGGTACTGTGAGTGGTTGAAAAAATCAGGGAAAAAGGTTCAATTGATTGAGTATCCAACCATGTTTCATGCATTTTATATTTTTCCTGAATTGCCAGAGTCATCTCGATTGGTCTCACAGGTCAAAGATTTCATCACCACACAATCTCTTATTTGA 999 0.5175 MTSQTPKSKLVLPLRTRAALSVLSALTDFSRRSDGTVKRGFLKILDIKSPCKAKSVNGVSTKDVTVDKYRKLWIRVYTPTSSSGDGVLPVVIFFHGGGFTFLSADSFAYDAVCRQFCRRTPAVVVSVNYRPTPEHRFPCQYDDGEDVLKFLAGNPSVLPENADLKKCFLAGDSAGANLAHHVAIRVAKSGLRGVRLVGLVSIQPWFGGEERTDSELKYKDAPLVSISRTDWLWKAFLPEGSDRDHWAVNVSGANSEDLSGLDYPNTLVIVGGFDPLQDWQRRYCEWLKKSGKKVQLIEYPTMFHAFYIFPELPESSRLVSQVKDFITTQSLI* 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra1g0857 332 Pfam alpha/beta hydrolase fold 91 307 IPR013094 GO:0016787
Vra1g0857 332 PANTHER ARYLACETAMIDE DEACETYLASE 7 328 - -
Vra1g0857 332 SUPERFAMILY alpha/beta-Hydrolases 40 327 IPR029058 -
Vra1g0857 332 Gene3D alpha/beta hydrolase 2 330 IPR029058 -
Vra1g0857 332 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 91 107 IPR002168 GO:0016787
Vra1g0857 332 PANTHER CARBOXYLESTERASE 18-RELATED 7 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra1g0857 Vra-Chr1 10071357 10072617 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra1g0857 7 329 Carbohydrate Esterase AT3G05120 37.092 4.38e-74 230
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra1g0857 - - pvu:PHAVU_004G074300g 525.783