Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra1g0856 ATGGCGCTATCCAAAGGCTCTGAAACGGCAAAACCTAAACCGGTTATACCATGGAAGGCACGCATTTCAATATCCTTTATTTCTACGATTACCGACGCTGCGCGTCGCTCTAACGGCACCATCAATCGCTGTCTAACGAACCTTCTCGATCTCAAGGCACACGCCAGTTCCTCACCCGTTAACGGTGTTACCTCTAAAGATGTCACCATTGACGCCGAAAACAAACTCTGGTTCCGAGTCTTCGCCCCCGCAGTCTCCCCTGCCGCCGGCACCCTCCCTGTCGTCGTCTACTTCCATGGGGGCGGCTTCGCGTTCCTCTCGCCGGACTCCCTCGGCTACGACGGCGTATGTCGCCGAATATGTCGCCACGTCCCCGCTGTCGTTGTTTCTGTCAACTACCGCCTCACACCGGAGCACCGGTACCCGTCGCAGTACGACGACGGTGAGCTCTTCCTCCACTTCCTCGACGAGAATTGCATGGTACTGCCGGAAAACGCTGATGTGTCAAAATGTTTCCTTGCCGGCGACAGCGCGGGGGCTAACTTAGCTCACAACGTGGCAGTTCGGGTCGGGAAGATGGGAATCGGGGAAAACCGGGATGGGAATTCAGGGCTTCGGAGAATCCGGGTGGTCGGGTTGGTGGCGATCCAGCCTTTTTTCGGTGGGGAGGAGCGGACGGAGGCTGAGGTGAGGTTTGAAGGTGCGCCGCTGGTGTCAACGGAGAGGAGCGATTGGATGTGGAAGGCGTTTTTGCCTGAGGGGTCGGATCGTGACCACAGAGCATGCAACGTGAGTGGGCCGAATTCGGAGGATTTGTCGGGTTTGGATTACCCGGATAGCGTTGTGGTTGTTGGTGGGTTTGATCCTTTACAAGATTGGCAAAGGAGATTCCCGTTCAATGCAGTCTGTAGAGAAAGACTATGTACTTGTCTATTCCCATTTTGCATCATTGGCGTCCCCTCTGATTCGTGCTGGCAGCTTAGAAGCCATTGCTGGACCTTCCAAACCCTAACAGAGTCACACGACAAGCCTGCATCGTCTACACCAACTACGTCATCCTCAAGTTTCAGTGCTAGTAGTGGGGTATAG 1089 0.55 MALSKGSETAKPKPVIPWKARISISFISTITDAARRSNGTINRCLTNLLDLKAHASSSPVNGVTSKDVTIDAENKLWFRVFAPAVSPAAGTLPVVVYFHGGGFAFLSPDSLGYDGVCRRICRHVPAVVVSVNYRLTPEHRYPSQYDDGELFLHFLDENCMVLPENADVSKCFLAGDSAGANLAHNVAVRVGKMGIGENRDGNSGLRRIRVVGLVAIQPFFGGEERTEAEVRFEGAPLVSTERSDWMWKAFLPEGSDRDHRACNVSGPNSEDLSGLDYPDSVVVVGGFDPLQDWQRRFPFNAVCRERLCTCLFPFCIIGVPSDSCWQLRSHCWTFQTLTESHDKPASSTPTTSSSSFSASSGV* 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra1g0856 362 Gene3D alpha/beta hydrolase 4 299 IPR029058 -
Vra1g0856 362 MobiDBLite consensus disorder prediction 340 362 - -
Vra1g0856 362 PANTHER CARBOXYLESTERASE 18-RELATED 11 297 - -
Vra1g0856 362 SUPERFAMILY alpha/beta-Hydrolases 53 297 IPR029058 -
Vra1g0856 362 Pfam alpha/beta hydrolase fold 95 296 IPR013094 GO:0016787
Vra1g0856 362 PANTHER ARYLACETAMIDE DEACETYLASE 11 297 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra1g0856 Vra-Chr1 10062634 10065937 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra1g0856 1 297 Carbohydrate Esterase AT3G05120 40.193 1.18e-70 223
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra1g0856 - - gmx:102665243 449.899