Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra1g0855 ATGGCTGCACCCACCAAACCAACCATTCCATGGAAGCTCCGTGTAACGACATCTCTGCTTTCTCTCCTTCTCAAAGCCTCTCGCCGCTCTAACGGCACCGTCAACCGCCGTCTCTTCAACCTCTTCGACACCCAGCTCCCTCCTAATCCCAACCCTATCGACGGCGTCACCACCTCTGACGTCACTGTCGATGCCACACGCAACCTCTGGTTTCGCCTCTTCTCTCCCACCACTTCCGCCTCTGCCGCCACCCTTCCTGTCGTCGTCTTCTTCCACGGCGGTGGCTTCACGTTCCTCTCCCCGGCCACAACCAGGTACGACGCTTTCTGCCGCTCCCTGTGCCGCTCCATCAACGCCGTCATCGTCTCCGTTAACTACCGCCTAGCCCCCGAACACCGTTACCCTTCCCAAAACGACGATGGTTTCGACGTCGTTAAATACCTCGACGAAAACGGCGCCACTTTGGGTAACGTTGGTAAGTGCTTTTTAGCGGGTGATAGTTCGGGCGGGAACACAGCGCACCACGTGGCAATTCGGGTTTGCAAAGAGAGGCTCCGATTCGTTAGAGTAATCGGGTTGGTTTCGATTGAACCGTTTTTTGGAGGGCAAGAGCGAGTCGAATCAGAGATCCGAATCACGCAAGACCCGGTGGTTTCGTTGGATGCTTCCGATTGGTATTGGAAGGCCATTTTGCCCAACGGGTCGGACCGTGACCACGAAGTTGTTAATGTGAGTGGGCCAAATGCGGTGGATATTTCCGGTTTGAACTATCCGAAGACGCTTTTGGTTGTGGCGGGTTTTGACCCATTAAAGGATTGGCAAAGAAGATACTCTGAATGGTTAAGAAAATCGGGTAAGGATGTTGAAATAATTGAATACCCGAAAATGATCCATGGGTTTCACTTGTTTCCATATTTACCCGAAGTTTCTCAGTTTCTTTCTCATGTTAACCATTTCATTGTCAAACAAGTAGCTGGTAGTTAG 984 0.5183 MAAPTKPTIPWKLRVTTSLLSLLLKASRRSNGTVNRRLFNLFDTQLPPNPNPIDGVTTSDVTVDATRNLWFRLFSPTTSASAATLPVVVFFHGGGFTFLSPATTRYDAFCRSLCRSINAVIVSVNYRLAPEHRYPSQNDDGFDVVKYLDENGATLGNVGKCFLAGDSSGGNTAHHVAIRVCKERLRFVRVIGLVSIEPFFGGQERVESEIRITQDPVVSLDASDWYWKAILPNGSDRDHEVVNVSGPNAVDISGLNYPKTLLVVAGFDPLKDWQRRYSEWLRKSGKDVEIIEYPKMIHGFHLFPYLPEVSQFLSHVNHFIVKQVAGS* 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra1g0855 327 Gene3D alpha/beta hydrolase 2 325 IPR029058 -
Vra1g0855 327 Pfam alpha/beta hydrolase fold 88 301 IPR013094 GO:0016787
Vra1g0855 327 PANTHER ARYLACETAMIDE DEACETYLASE 6 322 - -
Vra1g0855 327 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 88 104 IPR002168 GO:0016787
Vra1g0855 327 PANTHER ACETYL ESTERASE 6 322 - -
Vra1g0855 327 SUPERFAMILY alpha/beta-Hydrolases 6 320 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra1g0855 Vra-Chr1 10051914 10053064 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra1g0855 6 320 Carbohydrate Esterase AT3G63010 37.725 4.23e-74 231
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra1g0855 - - vra:106762998 656.366