Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra1g0822 ATGGAGAAAATGAGAGAGAATATTTCAGAAACTTGGCTAGTTTTGATCTCAGTGATATTGGTCACGGTCATATTTGCAAAAATAATTCTATTCAAGTTAGGGAAGGAAGATAAAAGAAAATGCAGATTACCACCAGGAAGGAGAGGGTGGCCTTTGATTGGAGACAGCATCAATTGGTACAATGCTGTTGCAAGTTCTCATCCTCCTCAGTTTGTTGAAGAAATGGTGAAGAGGTATGGTAAGATATTTTCATGCAGCCTATTTGGCAAATGGGCAGTGGTGTCAGCAGATCCAAGCTTCAACCGCTTTGTAATGCAGAATGAAGGAAGATTATTCATTTCCAGCTACCCAAAATCTTTCAGAGATTTGGTTGGAAAAAATGGTGTGATCACAGTGCAAGGAGAGCAACAAAGGAAGCTACATGGAATTGCCTCCAATATGATGCGTCTGGAGAAGCTTAAGTTCCACTTCTTGAATGATATCCAAAAGGTCATGGTCCAAACTTTGGGCAATTTTAACAACAACCAAGTCATTCTTCTCCAAGATGTTTGTAGGAAAGTGGCTATACATTTAATGGTTAATCAACTATTGGGGGTTTCAAGTGAGTCTCAAGTCAATGAAATGGCTCAGTTGTTTTCTGACTTTGTTGATGGTTGTTTATCCATTCCAATCAACATCCCTGGATATGCATACCACACTGCTATGAAGGCAAGGGAGAATATCATAAGCAAGATAAACAAGATCATTGAGGAACACAGACAAAATGGTGCTCCAATGGAAGGCAGTGGTGTACTTGGAAGATTGCTAGAGGAAGAAAGCTTGCCAGATGATGCTGTTGCGGACTTCATTATCAATCTTCTCTTTGCCGGAAATGAAACAACAACCAAAACAATGCTCTTTGCAGTCTATTTCCTTACTCAATGTCCTAGAGCCATGAAGCAGTTGCTGGATGAACATAGTTCACTGAGGAGTGATTCTGGAGATGAATTGCTCACATGGCAGGACTATAAAGCAATGCCATTCACTCAATGTGTCATTGATGAAACACTGAGACTTGGGGGCATTGCAATTTGGTTAATGAGAGAAGCAAAAGAAGACGTTCAGTACCAAGATTTCATTATTCCCAAAGGGTGCTTTGTGGTTCCATTTCTTTCAGCAGTCCATTTAGATGAGAAAGTATACAGTGGAGCTCTAGAGTTCAATCCTTGGAGATGGATGGAACATGAAAATGAGGAAAAGAGAAACTGGAGAAGTAGTCCATTCTATGCACCATTTGGTGGAGGTGCCAGATTCTGTCCAGGAGCAGAGCTGGCACGCCTTCAAATTGCTCTTTTTCTTCATTACTTTGTTACTACATACAGATGGACACAGATGAAGGAAGATAGGATGTCCTTCTTTCCCTCTGCTCGTTTGGTGAATGGTTTTGAAATCTGTCTAACAAGAAGACAGGATGAGACAGATTAA 1464 0.4057 MEKMRENISETWLVLISVILVTVIFAKIILFKLGKEDKRKCRLPPGRRGWPLIGDSINWYNAVASSHPPQFVEEMVKRYGKIFSCSLFGKWAVVSADPSFNRFVMQNEGRLFISSYPKSFRDLVGKNGVITVQGEQQRKLHGIASNMMRLEKLKFHFLNDIQKVMVQTLGNFNNNQVILLQDVCRKVAIHLMVNQLLGVSSESQVNEMAQLFSDFVDGCLSIPINIPGYAYHTAMKARENIISKINKIIEEHRQNGAPMEGSGVLGRLLEEESLPDDAVADFIINLLFAGNETTTKTMLFAVYFLTQCPRAMKQLLDEHSSLRSDSGDELLTWQDYKAMPFTQCVIDETLRLGGIAIWLMREAKEDVQYQDFIIPKGCFVVPFLSAVHLDEKVYSGALEFNPWRWMEHENEEKRNWRSSPFYAPFGGGARFCPGAELARLQIALFLHYFVTTYRWTQMKEDRMSFFPSARLVNGFEICLTRRQDETD* 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra1g0822 487 PANTHER CYTOCHROME P450 SUPERFAMILY PROTEIN 6 480 - -
Vra1g0822 487 Pfam Cytochrome P450 44 462 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra1g0822 487 Gene3D Cytochrome P450 33 481 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra1g0822 487 PANTHER CYTOCHROME P450 26 6 480 - -
Vra1g0822 487 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 425 434 IPR017972 GO:0005506|GO:0016705
Vra1g0822 487 PRINTS P450 superfamily signature 289 306 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra1g0822 487 PRINTS P450 superfamily signature 344 355 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra1g0822 487 PRINTS P450 superfamily signature 423 432 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra1g0822 487 PRINTS P450 superfamily signature 432 443 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra1g0822 487 SUPERFAMILY Cytochrome P450 39 482 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra1g0822 487 PRINTS E-class P450 group IV signature 70 93 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra1g0822 487 PRINTS E-class P450 group IV signature 280 306 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra1g0822 487 PRINTS E-class P450 group IV signature 339 355 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra1g0822 487 PRINTS E-class P450 group IV signature 388 406 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra1g0822 487 PRINTS E-class P450 group IV signature 416 432 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra1g0822 487 PRINTS E-class P450 group IV signature 432 450 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra1g0822 Vra-Chr1 9651642 9656797 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra1g0822 4 485 Cytochrome P450 AT1G73340 71.311 0.0 729
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra1g0822 - - ccaj:109804308 895.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra1g0822 1 9651642 9656797 Vra1g0822 1 9651642 9656797 ECH