Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra1g0814 ATGGTCATCATCACAAGAGATAAACATTTGTTAGATATTCATGGTGTTGAAAAACAGTATGAGGTTGATATTTTCAATGTTACGGAAGCTATGAAATTGTTTCGGTGGAATGCGTTAAGAAACAAAGTAGTTGATCCAAGTTGCACAGAAATCATAAAGCGTGAAATATACTATACCGGTGGTCTTCCATTGGCTTTGGAAACAATAGGCTCAAACTTGTTAGGTAAAATATTAGATGAATGGAAATCTGCATTGGATGCATGTGAAAAACTTCCAAGTAGAGGTATTCAAGAAATTCTTCAAGTAAGCTATGATGGCTTGGAGGAGAATGAGAAGGATATTTTTCTAGACATAGCTTGCTTCTTCAAAGGATGCACTGTGAAAAAAGTTACAGATATGCTAAATGCATGTGGCTTTCATACAGAATATGGAATTAGTGTGCTGCGAAATAAATCACTCGTTAACATTTTGATGTCTGGAGAACATGATGGTGAAATTGTGACAATGCATGACTTGATTCAATGTATGGGAAAAGAAATAGTTAGACAGCGATCAACCTTAACTGAAAAATGCAGTAGGTTGTGGTTTTATCAAGACATCTCTTGTGTTTTGGAGAAAAATATGGCAATTGATTCTAGTACAAGAAAATTCTATGTTTTGCCGGGAGAAAGGGTCCCAAAATGGTTTGACCACTCTACCAAGGGAAACTCTCTATGTTTCTGGTTTTGGAGGGATTTCCCCTCTATCACCGTGTGTACCATTTTAGGAGTTTTGGATAACATAGAAGGACCTTTCTTTGTGAAGTTTAATTTTTTTGTTACAATCAACGATATTGAAATACCTTTCCTCTTTGATTTCAACTACATTTTAGATACTGACCATATGTTTATGTTCAATAACTTTACGTATCCAATGAAATTGGATTGTGGAGGACTAGTTTCAGAGAATGAGTGGAGTTATGGGGAGGTTTTATCTGTGATACCACCCAATTCAGGTAGTTCAGAATCAATCAAATCGAGTGGAGTTTATGTAAACCGAACATGTACAACAACAATGGAGAATGTTAGATTCTCAAATCCTTATTCTCCCAATACTACATTTCCTACCGACCATGGTACAAGAAATCAGCTTGATATACAACAAGATTCATTTGACCCTGTCGTCTCTATGCACACCAGAATGTTAGACAAATTGGCTTACCTTAGCAACCGACAATGGCGTCGCCCTTTCATGTATCCAGAGTGGAAAGAACCTTTCGATAATGTTTTGAGCCCCAACTTGAGCGAAAGTGACTTGTCTATGTCATCATAG 1311 0.3677 MVIITRDKHLLDIHGVEKQYEVDIFNVTEAMKLFRWNALRNKVVDPSCTEIIKREIYYTGGLPLALETIGSNLLGKILDEWKSALDACEKLPSRGIQEILQVSYDGLEENEKDIFLDIACFFKGCTVKKVTDMLNACGFHTEYGISVLRNKSLVNILMSGEHDGEIVTMHDLIQCMGKEIVRQRSTLTEKCSRLWFYQDISCVLEKNMAIDSSTRKFYVLPGERVPKWFDHSTKGNSLCFWFWRDFPSITVCTILGVLDNIEGPFFVKFNFFVTINDIEIPFLFDFNYILDTDHMFMFNNFTYPMKLDCGGLVSENEWSYGEVLSVIPPNSGSSESIKSSGVYVNRTCTTTMENVRFSNPYSPNTTFPTDHGTRNQLDIQQDSFDPVVSMHTRMLDKLAYLSNRQWRRPFMYPEWKEPFDNVLSPNLSESDLSMSS* 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra1g0814 436 Gene3D - 25 108 IPR042197 -
Vra1g0814 436 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 2 207 IPR044974 GO:0006952
Vra1g0814 436 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 118 IPR027417 -
Vra1g0814 436 Pfam NB-ARC domain 2 104 IPR002182 GO:0043531
Vra1g0814 436 SUPERFAMILY "Winged helix" DNA-binding domain 96 204 IPR036390 -
Vra1g0814 436 PANTHER ARCHAEAL ATPASE 2 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra1g0814 Vra-Chr1 9568190 9569636 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra1g0814 97 246 WRKY Transcription Factor Family AT5G45050 31.126 9.63e-10 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra1g0814 - - vra:106757119 892.493