Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vra1g0809 | ATGCCTGGTCTGGTAGAATTGGATGTTTCCAATAATCAATTGCACGGCAAGGTGCCATCTTTTCGTGAGGGTGTAGTTGTTAAAACTGGTGGGAATCCTGATATTGGAAAGGATAAGCCTCAAGCCCCACCTGGCTCAAATCCTCAGGGTAAATCTGGAGGTCAATTTAAGAAAAATAATATTGGAGCAATTATTGGCTCTGTGTTGGGAGGTATCAGTTTAATTGGTTTGGTGGCTGCTCAACATGTGGAATCTGGGAATATGGTTATTTCAATCCAAGTGTTGAGACAAGTTACGAACAATTTCAGTGGGGCAAACATATTGGGGAGAGGTGGTTTTGGCACTGTATACAAAGGGGAATTGTACGATGGAACAAAAATTGCAGTGAAAAGGATGGAATGTGGAATGATGGTTGAGAAGGGGCTCACTGAGTTTGAGTCTGAAATTGCAGTACTAACTAAGGTTCGACATAGACATCTGATTGCATTGGAAGGCCACTGCTTGGATGGAAATGAGAAGCTTCTTGTGTATGAATACATGCCTCAGGGTCCTCTCAGTAAGCATCTATTTGACTGGAAAGAGCAAGGAATACAACCAATGGAATGGAAGAGAAGGCTTTCCATTACCTTGGATGTTGCCAGAGGTGTTGAATATCTTCACGGTTTGGCCCAGCAAATTTTTATCCATAGGGATCTAAAACCATCAAACATCTAA | 714 | 0.4202 | MPGLVELDVSNNQLHGKVPSFREGVVVKTGGNPDIGKDKPQAPPGSNPQGKSGGQFKKNNIGAIIGSVLGGISLIGLVAAQHVESGNMVISIQVLRQVTNNFSGANILGRGGFGTVYKGELYDGTKIAVKRMECGMMVEKGLTEFESEIAVLTKVRHRHLIALEGHCLDGNEKLLVYEYMPQGPLSKHLFDWKEQGIQPMEWKRRLSITLDVARGVEYLHGLAQQIFIHRDLKPSNI* | 238 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vra1g0809 | 237 | Gene3D | Phosphorylase Kinase; domain 1 | 75 | 179 | - | - | |
Vra1g0809 | 237 | Pfam | Protein tyrosine and serine/threonine kinase | 106 | 237 | IPR001245 | GO:0004672|GO:0006468 | |
Vra1g0809 | 237 | SUPERFAMILY | Protein kinase-like (PK-like) | 83 | 237 | IPR011009 | - | |
Vra1g0809 | 237 | SMART | serkin_6 | 102 | 237 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vra1g0809 | 237 | ProSiteProfiles | Protein kinase domain profile. | 102 | 237 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vra1g0809 | 237 | PANTHER | OSJNBA0070M12.3 PROTEIN | 80 | 237 | - | - | |
Vra1g0809 | 237 | PANTHER | OSJNBA0070M12.3 PROTEIN | 1 | 77 | - | - | |
Vra1g0809 | 237 | MobiDBLite | consensus disorder prediction | 29 | 54 | - | - | |
Vra1g0809 | 237 | Gene3D | Transferase(Phosphotransferase) domain 1 | 180 | 237 | - | - | |
Vra1g0809 | 237 | ProSitePatterns | Protein kinases ATP-binding region signature. | 108 | 130 | IPR017441 | GO:0005524 | |
Vra1g0809 | 237 | PANTHER | TRANSFERASE, PROTEIN KINASE RLK-PELLE-LRR-IX FAMILY-RELATED | 80 | 237 | - | - | |
Vra1g0809 | 237 | PANTHER | TRANSFERASE, PROTEIN KINASE RLK-PELLE-LRR-IX FAMILY-RELATED | 1 | 77 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vra1g0809 | Vra-Chr1 | 9514344 | 9515057 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vra1g0809 | 91 | 237 | Receptor kinase-like Gene Family | AT5G38990 | 47.973 | 2.73e-40 | 145 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-IX | Vra1g0809 | PK_Tyr_Ser-Thr | 7.9e-24 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vra1g0809 | - | K00924 | vra:106757099 | 468.003 |