Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra1g0783 ATGTGTCTTCCCCTTATATTCTTTTCTCTGTCCTGTTTTTCTTTACAGATTGTTCCCTTCTCTGTTTTTCTCTTGCATGCTCCTTTACATGTTGCGGATTACCCAGTTGGCCTACCGTCACAGGTGGAGAAAGTCAAGAAACTTTTGGATGTTGGATCAGATGATGTTGTCTACATGATAGGGATCCATGGAATGGGTGGGTTAGGAAAAACAACACTTTCTCTAGCAGTTTATAATTCAATTGCTGATGACTTTGATAGTTCATGTTTTCTTCAAAATGTAAGAGAAGAATCAAACCAACATGGGTTAAAACACCCACAAAGCATCCTTCTTTCAAAAATGCTTAGAGAGAATATCATCTTAACAAGTTGGCAAGAAGGAGCATCAATGATACAGGAGAGGCTGGGGCGGAAGAAGGTTCTCTTGATTCTAGATGATGTTGACAACAGAAAGCAGTTACAAGCATTTGCTGGAAGAGCTGATTGGTTTGGTCCCGGCAGCAGGGTTATCATTACCACTCGGGACGAACAGCTGCTAAAATCTCATGAGATTAAAAGAACTTATGAAGTGGAGAAATTGAATGATAATGATTCTCTTCAATTGCTTATATGGAATGCTTTCAAAAGGGAAAAAGTTGATCCGAGTTACGAGGACGTGTTGAAACGTGTAGTAACTTATGCTTCTGGACTTCCATTGGCTTTAGAAGTAATAGGTTCCAACTTGGTTGGAAAAAGTGTTGAAGAATGGGAGTCTGCGATTGAACATTACAAAAGAATTCCAAACGGTGAAATTCTAGAGATACTTAAAGTAAGCTATGATGCTTTGGGGGAAGAAGAAAAAAATGTCTTTCTTGACATCGCCTGTTTCTTTAAAGGAAGTAGTTTGGAAGAAGTTGAACATATACTTGGTGTTCTTTATGATAATAACATGAAACATCATATTGGGGTGTTGGTTGAAAAATCTCTCATAAAGGTTCAGGATGAAAGGTTTGGTGTAATTCAAATGCACGACTTGATTGAGGACATGGGTAGAGATATTGACCGGCAAGAGTCACCCAAAGAGCCAGAGAACCGCATGAGATTATGGCTAGGGAAAGATATTCTTCATGTTTTAAAACACAACAAGGGAATTAGCAAAACTGAAATCATACGCCTGGATTTGTCTAAATCTGAGAGAGAAGAAACGCTAGAATGGAATCCCAACGCCTTCAGAAGGATGAAAAGCCTTAAAATACTTATCATTAGAAATGGTAAATTTTCCAAAGGTCCCAATTATCTTCCAAAAAGTTTGAGAGTACTGGAATGGCATGGATACCCTTCAAATTGTTTTCCATCAAATTTTGATCCGAGAAATCTTGTGACATGCAAGTTACCTCACAGTCGGTTTACGTCATTTGGATTCCTTGGCTCATCAAAGAAGTTCGAGAATCTAACTGTCTTGAAGTTTGACTGGTGCATATATTTAACACACGCACCCGATATGTCTGATCTCGGAAATTTGGAGCACGTTTCATTTCAATGGTGTGAGAATTTAGTTGCAGTTCACGACTCAATTGGTTTTTTGAGTAAACTTAAAATATTGAATGCGAGAAATTGCAAGAAGCTTATGAGTTTTCCTCCTCTCAACTTGCCCACTCTTGAAAGCCTACAACTTTCATATTGTTCCAGTCTTGAGAAATTTCCAGAAATACTAGGAAAGATGGGAAACATAATGGAACTTAATTTGTACCTTCCCATTAAAGAATTGCCACTGTCGTTTCAAAATCTTATTGGACTTAAAAAATTATACTTGTCATATGAAATTGATCACTTACGAAGTAGCATTGTCACGATGCCTAACTTGATTGATTTTAGAGTTACTAATTGCAAGAGGTGGGAATGGGTAAAATCAGAAGATGCTGAAGATAACTTAGGCTCAATGGTTCCTTCAGAGTTAGATACCTTTGCTGCCAAGTCTTGCAACCTGGATGATGACTTCTTTGCAGTAGGTTTCATGCGATTGGCACACGTGCGTTGGTTATGTCTATCATTCAATAATTTCAAACACCTTCCTGAATGCATCAAAGAATTTCACAACCTCAACCAACTTGATGTGAGTCATTGCAAACATCTTGAGGAAATCAGAGGGTTTCCACCAAAATTAGAATATTTCAATGCGACAAACTGTATATCTTTGACGCCCACCAGCTTAAGCATGTTGCTAGATAAGGAACTATACGAAGCTAGAAAACCTCACTTCAGGTTTCCAGGAGAAAGTATTCCAAAGTGGTTTGATCTCAAGAGCAGTGGACCTTCATGTTCTTTCTGGTTTCGTAATAGGTTTCCTGCCAGAGTTCTTTCTCTTCTTATTATACATATGGATATAGATAAGTTTAGCTTCGTTACACCAGAAGTGTACATTAATGGGAAATGTCATGGAAGCTCAGGCACCTATTTGCTTAAAGAGGAGAGGATGTTTGAATTCGATCAAACATACCTCTCTGATCTAGGAAGGCTTCATAATTTGTTTGAACAACCTTTAGAAAAAGAATGGAATCATGTGAAGGTTACCTATGATGAAAGTTTCTTAAATATGTCAAGAAATAAAGTAACAATTAAAGCAACAGGAATTCATGTATTCAAAGAGGAAAACATGGAAGACATTCGGTTTGATGATCCTTATATCAGGGAAGACATCATTGAAGAAGAAGATGAGAAAGAAAAGGAAGAAGAAAAAGAGGAAGAAGAAGAACTAAATTTCCGATAA 2745 0.3756 MCLPLIFFSLSCFSLQIVPFSVFLLHAPLHVADYPVGLPSQVEKVKKLLDVGSDDVVYMIGIHGMGGLGKTTLSLAVYNSIADDFDSSCFLQNVREESNQHGLKHPQSILLSKMLRENIILTSWQEGASMIQERLGRKKVLLILDDVDNRKQLQAFAGRADWFGPGSRVIITTRDEQLLKSHEIKRTYEVEKLNDNDSLQLLIWNAFKREKVDPSYEDVLKRVVTYASGLPLALEVIGSNLVGKSVEEWESAIEHYKRIPNGEILEILKVSYDALGEEEKNVFLDIACFFKGSSLEEVEHILGVLYDNNMKHHIGVLVEKSLIKVQDERFGVIQMHDLIEDMGRDIDRQESPKEPENRMRLWLGKDILHVLKHNKGISKTEIIRLDLSKSEREETLEWNPNAFRRMKSLKILIIRNGKFSKGPNYLPKSLRVLEWHGYPSNCFPSNFDPRNLVTCKLPHSRFTSFGFLGSSKKFENLTVLKFDWCIYLTHAPDMSDLGNLEHVSFQWCENLVAVHDSIGFLSKLKILNARNCKKLMSFPPLNLPTLESLQLSYCSSLEKFPEILGKMGNIMELNLYLPIKELPLSFQNLIGLKKLYLSYEIDHLRSSIVTMPNLIDFRVTNCKRWEWVKSEDAEDNLGSMVPSELDTFAAKSCNLDDDFFAVGFMRLAHVRWLCLSFNNFKHLPECIKEFHNLNQLDVSHCKHLEEIRGFPPKLEYFNATNCISLTPTSLSMLLDKELYEARKPHFRFPGESIPKWFDLKSSGPSCSFWFRNRFPARVLSLLIIHMDIDKFSFVTPEVYINGKCHGSSGTYLLKEERMFEFDQTYLSDLGRLHNLFEQPLEKEWNHVKVTYDESFLNMSRNKVTIKATGIHVFKEENMEDIRFDDPYIREDIIEEEDEKEKEEEKEEEEELNFR* 915
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra1g0783 914 MobiDBLite consensus disorder prediction 890 907 - -
Vra1g0783 914 Gene3D Ribonuclease Inhibitor 365 575 IPR032675 -
Vra1g0783 914 Gene3D - 25 187 IPR027417 -
Vra1g0783 914 SUPERFAMILY L domain-like 394 731 - -
Vra1g0783 914 Pfam NB-ARC domain 41 262 IPR002182 GO:0043531
Vra1g0783 914 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 24 758 IPR044974 GO:0006952
Vra1g0783 914 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 21 286 IPR027417 -
Vra1g0783 914 Gene3D Ribonuclease Inhibitor 579 740 IPR032675 -
Vra1g0783 914 Gene3D - 192 276 IPR042197 -
Vra1g0783 914 PRINTS Disease resistance protein signature 59 74 - -
Vra1g0783 914 PRINTS Disease resistance protein signature 134 148 - -
Vra1g0783 914 PRINTS Disease resistance protein signature 227 241 - -
Vra1g0783 914 PRINTS Disease resistance protein signature 541 557 - -
Vra1g0783 914 SUPERFAMILY "Winged helix" DNA-binding domain 263 372 IPR036390 -
Vra1g0783 914 MobiDBLite consensus disorder prediction 890 914 - -
Vra1g0783 914 PANTHER DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR CLASS) 24 758 - -
Vra1g0783 914 Coils Coil 889 914 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra1g0783 Vra-Chr1 9238022 9249884 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra1g0783 36 730 WRKY Transcription Factor Family AT5G45050 28.748 2.80e-72 258
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra1g0783 - - var:108344036 1322.38