Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vra1g0775 | ATGCTTCTTGCTTTCCGTTGTTTTGAAGAAGAATGGGAATCTGCTATAAATAAAAATGACCCTGTTGGACTGGAGTCACGTTCAGATGCATTCTGCTACGATGTGTTCCTCAGCTTCATAGGCATAGACACACTCTATGGTTTTACAGGCCATCTCTACAAAGCTCTTAATGACAGTGGAATCCACACTTTCATTGATGATGAAAACCATCAGACAGGAGAGGAAATTACACCAACAACTGTGAAAGCAATTGAAGAGTCCAGGATTGCTATCACTGTGCTTTCTATAAACTATGCTTCTTCCACTTGGTGCTTAGATGAACTTGCAACCATTCTTGACTGCCTTAATAGAGAAAGACTGCTGGTCTTACCAGTCTTTTATTATGTGGATCCCACTCAGGTGCAATTGCAGAAAGGCAGGTTTGGAGAAGCCTTGACTAAGCATGAGGAGAGGCTCAAACATAACATGGAAAAGTTGTTGAAATGGAAGATGGCTCTTCATCAAGTAGCTAACTTGTTTTTCTTTCATATCGACCATGGGGCTGGTTATGAATATGAGTTTATTGGGAAGATTGTGGAGTGGGTCTCCAAGAAGATTAATCATGCTCATTATCCAATTGGACTAGAGTCACAAGTGCAAGAGGTAATGAAACTTTTGGATGTTGGATGTGATGGTGGTGCCCACATGATCGGGATTCATGGAACTGGTGGGGTTGGAAAATCGACACTGGCTCAAGAAGTTTATAATAATTTGATTTCTGAAAGGTTTGATGCTTCATGTTTTATTGAAAATGTGAGAGAAAAATCAAACAAGCACGGGTTACAATACCTCCAAAGCACCATTCTNGAGAATTTACTTGGAGAGAAGGACATCAAGTTAACTAGTGTGGAACAAGGAATTTTAATGATACAACGCAGGCTCCAGAAAAAGAAGGTTCTCTTGATTCTAGACGATGTTGACAGGCAGGAGCAATTGCAGGCAGTTGTTGGAAGAGCTGATTGGTTTGGTCGTGGCAGCAGAGTCATAATCACAACACGAGATGAACAGCTCCTTGCCTCCCATGATGTTCAAATAACTTATGAGGTGAAGAAATTAAATAACAAGGATGCTCTTGTATTGCTTAAATGGAAAGCTTTTAAAAATCATGACTTTGATCCAAGGTATGAGGAGCTCTTGAATCTTGCAGTAACTTTTTCTGATGGCATTCCATTAGCTTTGGAAGTAATAGGTTCCAACTTGTGTGGAAAAAGTGTAGAAGAATGGAAATCTGTCATTCATCAATTAGAAAAATGTCCAAGTAATCCGGTCGAAACAGTACTTAAAGCAAGCTTTGATTCTTTGGAGGAAAAAGAAAGGAGTGTTTTCCTTGACCTTGCTTGTTGCTACAAAGGATATGAATTGGCAGAGGTCGAAGATATACTTCAAGCTCATTATGGTCAGAACATGAAGTGTTACATTGACTCATTGGTTGAGAAATCTTTAGTTAAGCTTAGTCATGGTACAAAACCTTGTTATGACAGAGTTACATTGCATGACATGATTGAGGACATGGGTAAAGATATTGTCCGACAGGAATCATTGANAGGGCCAGGTGAGCGTACGAGATTATGGTTACTCGAAGATGTAAGACAACTTTTAGAAAACAACAGGGGAACTAGTAAAATTGAAATCATATGTCTGGATTTCTCCATATTTGATCAAGAAGAAAAAGTAGAATGGGATGGAAAGGCCTTCCAGAATATGCAAAACCTCAAAACACTTATTATTAGACATGGTAGTTTTTCCAAAGGTCCAGAATATCTCCCAGATAATTTGAGAGTGATAGAATGGTGGAGATATCCGTCAAATTGTTTACCATCTGATTTTCAGCCAAAGGAACTTGCCATATGCAAGTTACCCTGCAGTAGTATTTCGACAATTGAGATGAAAAACTTATTGAAGAAGTCGGTGAATCTAAGAGTTTTGAAATTTTCAAATACAAAGGTTTAA | 1989 | 0.3866 | MLLAFRCFEEEWESAINKNDPVGLESRSDAFCYDVFLSFIGIDTLYGFTGHLYKALNDSGIHTFIDDENHQTGEEITPTTVKAIEESRIAITVLSINYASSTWCLDELATILDCLNRERLLVLPVFYYVDPTQVQLQKGRFGEALTKHEERLKHNMEKLLKWKMALHQVANLFFFHIDHGAGYEYEFIGKIVEWVSKKINHAHYPIGLESQVQEVMKLLDVGCDGGAHMIGIHGTGGVGKSTLAQEVYNNLISERFDASCFIENVREKSNKHGLQYLQSTILENLLGEKDIKLTSVEQGILMIQRRLQKKKVLLILDDVDRQEQLQAVVGRADWFGRGSRVIITTRDEQLLASHDVQITYEVKKLNNKDALVLLKWKAFKNHDFDPRYEELLNLAVTFSDGIPLALEVIGSNLCGKSVEEWKSVIHQLEKCPSNPVETVLKASFDSLEEKERSVFLDLACCYKGYELAEVEDILQAHYGQNMKCYIDSLVEKSLVKLSHGTKPCYDRVTLHDMIEDMGKDIVRQESLXGPGERTRLWLLEDVRQLLENNRGTSKIEIICLDFSIFDQEEKVEWDGKAFQNMQNLKTLIIRHGSFSKGPEYLPDNLRVIEWWRYPSNCLPSDFQPKELAICKLPCSSISTIEMKNLLKKSVNLRVLKFSNTKV* | 663 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vra1g0775 | 662 | SMART | till_3 | 32 | 172 | IPR000157 | GO:0007165 | |
Vra1g0775 | 662 | PANTHER | LEUCINE-RICH REPEAT-CONTAINING PROTEIN | 35 | 645 | IPR044974 | GO:0006952 | |
Vra1g0775 | 662 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 203 | 458 | IPR027417 | - | |
Vra1g0775 | 662 | Gene3D | - | 31 | 196 | IPR035897 | - | |
Vra1g0775 | 662 | Gene3D | - | 364 | 448 | IPR042197 | - | |
Vra1g0775 | 662 | PRINTS | Disease resistance protein signature | 229 | 244 | - | - | |
Vra1g0775 | 662 | PRINTS | Disease resistance protein signature | 306 | 320 | - | - | |
Vra1g0775 | 662 | PRINTS | Disease resistance protein signature | 399 | 413 | - | - | |
Vra1g0775 | 662 | PRINTS | Disease resistance protein signature | 579 | 595 | - | - | |
Vra1g0775 | 662 | Pfam | NB-ARC domain | 209 | 447 | IPR002182 | GO:0043531 | |
Vra1g0775 | 662 | Gene3D | - | 197 | 359 | IPR027417 | - | |
Vra1g0775 | 662 | ProSiteProfiles | TIR domain profile. | 31 | 199 | IPR000157 | GO:0007165 | |
Vra1g0775 | 662 | CDD | AAA | 206 | 351 | - | - | |
Vra1g0775 | 662 | Pfam | TIR domain | 33 | 201 | IPR000157 | GO:0007165 | |
Vra1g0775 | 662 | SUPERFAMILY | "Winged helix" DNA-binding domain | 436 | 547 | IPR036390 | - | |
Vra1g0775 | 662 | SUPERFAMILY | Toll/Interleukin receptor TIR domain | 27 | 172 | IPR035897 | - | |
Vra1g0775 | 662 | PANTHER | DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR CLASS) | 35 | 645 | - | - | |
Vra1g0775 | 662 | SUPERFAMILY | L domain-like | 573 | 661 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vra1g0775 | Vra-Chr1 | 9132739 | 9135799 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vra1g0775 | 33 | 635 | WRKY Transcription Factor Family | AT4G12020 | 28.778 | 6.12e-57 | 207 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vra1g0775 | - | - | vun:114181896 | 1129.39 |