Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra1g0740 ATGAATGCTTCAATGAGGAAAAAGGTTCAAAGGAAGTGTAAGATAATAGGATACAATCTCAAAGTCGATGCTCTCGATGAGATCCTCTCCTTCGCATCTCGCTTCGAAGGCGACGAGGATGAAGCAATCGATGTCCTCCTCAAAGAGCTCGAAAAATCTCTGAAATCCACCATAATCGACAAGGAGACAGTGCACCGTGTGGTGAGCCAACTGCTGGAAGTTGAGGCGGACATGGAGGATAGCTCCGATGCTGGCACCAGCACCTCTTCCGCCATTCGCGTTGTCGATGCGTTTCTCGTCCCGAAGTATAAATACGACACTGTCAGAAAGCAGTTCTACGAGCACACAGGCACCTTGTCTATTCACGGAGACGCATCTGCAAAAGCAGCTTTGTACAGGGATAGGTTTCTATTGTTGTCCCAGAGGCTCTCTCGTGACCAGCATTTTTCCAAACCTGCTTTTGAATCTGAATTTTCTCATTTCGGGAGTTGTGAGATATCTCCTATTCAATCTCTGGTTGGGCAAACAGGTAGAAAATGGGTGATGGGCGTAATATCTCAGCTGGAAGATGGTCATTACTATTTGGAAGACCTTACAGCTGCAGTTAAAATTAACTTGGCCAATGCAAAGATAACTACAGGACTTTTTTCAGAGAACACTATAGTTGTGGTTGAAGGGGAGATGCTCGTGGAGGGTATTTTTCAGGTCTTAACATGTGGATTTCCTCCCCTGGAGGATAGAGATAAGTCTCTGAAAGTACTTGCAGGGAATGACTTTTTTGGTGGTGGTACTCTTTCAAAAGAGGAAACTATTAGACTGGAAGAGATGGAGAAAAGAGCAGTAAATGACATGTTTGTCATACTTTCTGATGTTTGGCTAGACAATGAAGAGGCTTTGACAAAACTAGAGACTGTTCTGGATGGTTTTGAGAGTGTGGAAGTGGTTCCTTCCTTATTTGTTTTCATGGGAAACTTCTGTTCTAGGGCATGTAACCTTTCATTTCATTCTTATTCGAGCCTCAGAATGCAGTTTGGTAAGCTGGGGGAAATGATTGCTGCCCATACACGGCTGAAAGAGCAGAGTCAATTCCTGTTTATCCCAGGTCCCGATGATGCAGGTCCTTCCACTGTTCTTCCTAGATGTGCTCTACCAAAATATTTAACTGAAGAACTCCAAAAGCACATACCCAATGCCATATTTTCAAGCAACCCTTGCAGGGTTAAATTTTATACCCAAGAAATTGTATTTTTCCGCCAGGATATGCTGCATAGAATGCGTCGCTCATGTTTGATGTCTCCTTCTACCGAAGAAACTGATGATCATTTTCAACATCTTGTTGCTACCATAACCCATCAAAGTCATCTCTGTCCACTGCCCCTTACTGTTCAACCTATCATTTGGAATTATGACCATTGTCTTTATCTTTATCCAACTCCTCACACGATAGTTTTGGGTGACAGAAGTCAGCAGAAAGCATTCAAGTACACAGGAATCACTTGTTTTAATACTGGTTCCTTCTCAATTGACAGCACGTTTGTGGCATATCGTCCCTGCTCTCAGGAAGTTGAATTGTCAGCCTTGTAG 1584 0.4331 MNASMRKKVQRKCKIIGYNLKVDALDEILSFASRFEGDEDEAIDVLLKELEKSLKSTIIDKETVHRVVSQLLEVEADMEDSSDAGTSTSSAIRVVDAFLVPKYKYDTVRKQFYEHTGTLSIHGDASAKAALYRDRFLLLSQRLSRDQHFSKPAFESEFSHFGSCEISPIQSLVGQTGRKWVMGVISQLEDGHYYLEDLTAAVKINLANAKITTGLFSENTIVVVEGEMLVEGIFQVLTCGFPPLEDRDKSLKVLAGNDFFGGGTLSKEETIRLEEMEKRAVNDMFVILSDVWLDNEEALTKLETVLDGFESVEVVPSLFVFMGNFCSRACNLSFHSYSSLRMQFGKLGEMIAAHTRLKEQSQFLFIPGPDDAGPSTVLPRCALPKYLTEELQKHIPNAIFSSNPCRVKFYTQEIVFFRQDMLHRMRRSCLMSPSTEETDDHFQHLVATITHQSHLCPLPLTVQPIIWNYDHCLYLYPTPHTIVLGDRSQQKAFKYTGITCFNTGSFSIDSTFVAYRPCSQEVELSAL* 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra1g0740 527 Gene3D - 2 70 - -
Vra1g0740 527 PANTHER DNA POLYMERASE EPSILON SUBUNIT B 5 526 IPR016266 GO:0003677|GO:0006261|GO:0008622
Vra1g0740 527 PIRSF DNA_pol_epsilon_2 1 527 IPR016266 GO:0003677|GO:0006261|GO:0008622
Vra1g0740 527 Pfam DNA polymerase alpha/epsilon subunit B 285 490 IPR007185 GO:0003677|GO:0006260
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra1g0740 Vra-Chr1 8713290 8717999 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra1g0740 17 484 Core DNA Replication Machinery Family AT5G22110 70.149 0.0 705
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra1g0740 K02325 - gmx:100784116 916.376