Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra1g0694 ATGTGTTTCAGACCACGCTGCAGCTTCTGCTACATCTTCTTCACACTTTACACCCTTATCTTCATGTTCATGCTTTCTTTGATACTCTTCTGGATAATCATATCTCCTTCAAGTGTCAAGTTCCACGTAACCGATGCCTCTCTAACACAGTTCAACCTCAACACAAACAACAACACCTTGTATTACAACTTCAAGGTCAATGTCACAGTGAGAAATCCCAACAACAACATCGTAGTGTACTATAGGAAGATCACAGCAATAGCTTGGTACAAAGATAATGCTTTTGGTTGGGTGAGCTTAACACCCTTTGACCAAGGCCACAAGAACACCACCTTCCTTCAAGCAGTGTTTGTAGGGAAGAGTGTGATTAAGCTCAAAGCTAAACAACTTGGTGAGTATAAAGAGGAGACAAATGCTGGGATTCACAAGGACTTAGCTGTGGATTTTGATCTTAATATCAGAGCCAAGTATGCAAGATTCAAGAGTTCTCGTTTCAATCCACCCATTGTTCAGTGTCGTCGCTTAAGAGTTCCTTTGATTTCTAATGGCAAATCAGCATCTCCTTTTGCTGTCACCAGATGCAGCAGTGCCTATTTCTTTTCTGATCGTGATGCTGATGCATAG 624 0.4151 MCFRPRCSFCYIFFTLYTLIFMFMLSLILFWIIISPSSVKFHVTDASLTQFNLNTNNNTLYYNFKVNVTVRNPNNNIVVYYRKITAIAWYKDNAFGWVSLTPFDQGHKNTTFLQAVFVGKSVIKLKAKQLGEYKEETNAGIHKDLAVDFDLNIRAKYARFKSSRFNPPIVQCRRLRVPLISNGKSASPFAVTRCSSAYFFSDRDADA* 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra1g0694 207 PANTHER HARPIN-INDUCED 1 18 199 - -
Vra1g0694 207 PANTHER OS05G0367900 PROTEIN 18 199 IPR044839 GO:0098542
Vra1g0694 207 Pfam Late embryogenesis abundant protein 67 162 IPR004864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra1g0694 Vra-Chr1 8159644 8160716 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra1g0694 33 179 SNARE and Associated Proteins AT1G32270 30.612 2.32e-19 82.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra1g0694 - - gmx:100784278 362.459