Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vra1g0693 ATGTGTTGCAGAGACCGCTGCATACGTTGCATTTGCTGCACAATCATCACCCTCGTACTGTTGTTCATAGTTTCCTCAATCATCTTCTGGATAATCATCTCTCCATCAAACATGAAGTTCCATGTAACTGATGTCTCCCTCACACAATTCAACCTCACAAACAACAACACCTTGTATTACAACTTCAAGGTCAACGTCACGGTGAGAAACCCCAACAACAACATCGTAGTGTACTATAGGAGGATCAAAGCGATAGCTTGGTACAAAGACAATGATTTTGGTCGGGTAAACTTGACACCCTTTGACCAAGGACACAAGAACACCACTGTCCTTCAGGTATTGTTTGAAGGGCAAAGCTTGCTTAAGCTCAGACGTCAACAACTTGGTGAGTATAAAGAAGAGACAAGTGTCGAGGTTTACAATGACATGGCTGTGGATTTTGATTTCAGAATCAGAGCCAAGTTTGGAAAGTTCAAGAGTAGTCGTTTCAATCCTCCCATCGTTCAGTGTCGTCGTTTGAGTGTTCCTTTGATTTCTAAGGGTAAATCATCACCTCCTTTTAGTGTCAGAAACTGTAGAATTGGTCGTTCTTTCTTTGTTGATCGTGATGCTGAAGCTGAATGGTAA 627 0.4195 MCCRDRCIRCICCTIITLVLLFIVSSIIFWIIISPSNMKFHVTDVSLTQFNLTNNNTLYYNFKVNVTVRNPNNNIVVYYRRIKAIAWYKDNDFGRVNLTPFDQGHKNTTVLQVLFEGQSLLKLRRQQLGEYKEETSVEVYNDMAVDFDFRIRAKFGKFKSSRFNPPIVQCRRLSVPLISKGKSSPPFSVRNCRIGRSFFVDRDAEAEW* 209
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vra1g0693 208 PANTHER OS05G0367900 PROTEIN 17 197 IPR044839 GO:0098542
Vra1g0693 208 Pfam Late embryogenesis abundant protein 65 160 IPR004864 -
Vra1g0693 208 PANTHER HARPIN-INDUCED 1 17 197 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Vra1g0693 Vra-Chr1 8150213 8151169 Dispersed/Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra1g0693 32 151 SNARE and Associated Proteins AT1G32270 33.058 1.09e-19 83.6
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra1g0693 - - gmx:100783747 288.5