Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra1g0690 ATGGTCTTCAAGGGAAGGTTCTTCTCTTCCAAAAAATCTGATTCCTCTAGCCCCGATGCGTCATCCAACAGTCCTCGATCTTTCTCCTCCAATTCCCCTTCCAGATCCGACAAGAAGAAGGCTAAATCCGCTGCTCATCCAACTTTAGCAGCCGGAGGCGGCGGTGGAGCTCTTGCTGCGTGTCGTCAGACGCAGGTGAAGGACGGGACCAAGAAGAAGGATGTGGTCAAGGGGAAGGAAAGTCAAACTCCGCCGCCGGAAGCTCGCAAGGATTCTCCGGTGAAGAAGTTGACGGCGGCGGAGGGACGGGAATCGTCGGTGTCGCCGATTCTGGCGTCGTCGCTCGGGCTGAACAGGATCAAGACGAGATCGGGACCGCTGCCGCAGGAGAGCTTCTTCGGGTTCAGGGGCGAGAAGGGAACCACGGCGCTAGGCGGCAGCAATCTCTCCCGTCCCGGCGTCGGCGTGCGCGGCGGCGATGGGAAGAAGAAGGAACCGGCCAATCAGAACAGGGTCGGGTTTCGTGAGGGTTCCCATGGCGGTGCCAGTGCTACCGGAGGGTGGGGCGATAATGGGAGCAATTCTGACAGCGTGTCAACCTTGGGGAGTATGCCGCCAAGGGAGCAGAGTCCGGTGGTGTTGCCTCGGTCGCGGTTGCAGAACGGAGAATCGTCCTCGGAAGCCGCAGCAGGCAAGCAGGCATCGTCATGGGCTCAGTCTGGAGGCTTAAGAAGTGCAGATGTTTGTACTCCAGAGACGGCATATGATTTTGAAAACCCAAAGGAGTCTGAATCTCCTCGCTTTCAAGCCATATTACGTGTCACTAGTGCACCTAGAAAGAGGTTTCCTTCGGATATCAAAAGTTTTTCCCATGAGTTGAATTCAAAAGGTGTCTGGCCTTTTCCATTTTTGAAGCCCCGGCGGTTGAATAACCTTGAGGAGATTTTGGTCGTTATTAGGGCAAAATTTGATAAAGCGAAGGAAGATGTAAACTCCGATTTAGCCATTTTTGCGGCAGATCTGGTAGGAATTCTTGAAAAGAATGCAGATACTCATCCTGAATGGCAAGAGACAATTGAGGACTTGCTAGTTTTGGCAAGGAGCTGTGCTATGACTTCATCTGGCGAGTTTTGGCTTCAGTGTGAAAGCATAGTTCAGGAGTTGGATGATAGGCGTCAAGAGCATCCTCCTGGGATGCTAAAGCAGCTTCACACCCGAATGCTTTTCATTCTCACGAGGTGTACCCGATTATTGCAATTCCACAAGGAAAGTGGTTTGGCTGAGGATGAACCTGTTTTCAATCTTCGTCAATCAAGAGTCTTGCATTCTGCTGGAAAATGTATTCCTCCTAGTGTGGGAAGGGATTCTAAAAGTTCAAGTGCTGCAAAAGCCTTAAAGCCTTCATCTAAAAAAGCTTTTAGTCAAGAACAGAGTATGATGGGTTGGAAGAAAGATGTTATGCAACCGGAAAATCTTTCACTTCCTGCTGATGATGATAATACAAAACATTTTGACTCTTCAGGCAGGGATCGAATGGCTTCTTGGAAGAAATTCCCGTCTCCATCTGGAAAAAGCCCTAAAGAAGCTGCTCAGTTGAAGGAACAAAATTATGGGAGGGTTGAATCTTCAAAGGCATCAATTAATAAGAGATTTCCTTCTGATGTGGACCTTTCTACTGCAAAGCCATCTGAGTTTCTTCCTATCAAAGATTCCTTGGATCATGCTTCCAAACACCAACATAAAGTTTCTTGGGGATACTGGGGAGATCAGCAGAATAATAGTGAGGAGAACTCAATAATTTGTCGTATATGTGAAGAGGAAGTTCCTACTTCACATGTTGAAGATCATTCGAGGATTTGTGCAGTTGCTGATAGATGCGATCAGAAGGGACTGAGTGTCAATGATCGTCTTGTCAGAATTGCTGAAACACTAGAAAAGATGATGGAGTCTTGTTCACAAAAGGATACCCAACAAATGGTGGGAAGTCCTGATGTTGCAAAAGTATCAAATTCTAGTATGACTGAAGAATCTGATGTTCCTTCTCCTAAACTTAGTGATTGGTCTCGCAGAGGCTCAGATGACATGCTAGACTGTTTCCCCGAAACTGATAATTCTGCTTTTATGGATGACCTGAAAGGATTACCACTTATATCATGCAAAACTCGTTTCGGTCCAAAGTCTGACCAAGGTATGACAACATCATCTGCAGGGAGCATGACTCCAAGGTCACCGTTGATGACACCACGGACAAGTCAGATTGACTTGCTCTTGGCGGGGAAGGGTGCTTATTCTGAACATGATGATCTGCTGCAGATGAATGAACTTGCTGATATAGCTCGATGTGTGGCAAATGCACCTCTGGACGATGATCGCACAACTTCATATTTATTATCTTGTCTCGATGACTTGCGGGTTGTTGTAGAACGAAGGAAATTTGATGCACTTACTGTGGAGACCTTTGGAACACGTATTGAGAAGCTGATACGAGAGAAGTATCTGCAGCTCACTGAGATGGTGGATGTTGAAAAGATAGATACAGAGAGCACCGTTGATGATGATGTTCTTTTGGAAGATGATGTGGTTCGTAGTTTGAGAACAAGCCCAATCCATTCATCAAGGGATCGTACCTCTATTGATGACTTTGAAATTATAAAACCTATCAGTCGTGGGGCATTTGGGAGGGTTTTCTTGGCTAAAAAGAGAACAACCGGTGATCTTTTTGCAATAAAGGTTCTCAAGAAGGCAGATATGATCCGTAAAAATGCTGTGGAAAGTATATTAGCAGAACGTGATATCTTAATTACAGTACGCAATCCTTTTGTGGTTCGATTCTTCTATTCTTTTACATGTCGTGAAAACTTATATCTTGTTATGGAGTATTTGAATGGAGGTGACCTGTATTCATTATTAAGAAATTTAGGTTGCCTAGATGAGGAAGTTGCTCGAGTATATATTGCTGAAGTGGTGCTTGCGTTAGAGTATTTGCATTCCCTGCATGTGGTTCATCGAGATCTGAAGCCTGACAATTTATTGATAGCGCATGATGGTCACATCAAGTTAACAGACTTTGGGCTTTCTAAGGTTGGTCTCATCAACAGCACAGATGATCTGTCTGGCCCAGCAGTGAATGGGACATCCCTACTTGAAGAGGATGAGGCTGCTGATGTATTTACATCTGAGGATCAATGGGAAAGGAGGAAAAAACGCTCTGCAGTGGGCACGCCTGATTACTTAGCCCCAGAGATACTTTTGGGAACTGGACATGCGTATACTGCCGATTGGTGGTCTGTTGGGGTCATTTTATTTGAGTTGCTTGTTGGTATTCCACCCTTCAATGCCGAGCATCCTCAGACTATATTTGATAATATTCTTAATCGTAAAATACCTTGGCCTTCAGTTCCTGCAGAGATGAGTCCTGAAGCACAGGATCTTATTGATCGATTATTGACAGAAGATCCTAATCAGAGACTGGGATCTAAAGGCGCATCAGAGGTAAAGCAACATGTTTTCTTCAAGGATATAAACTGGGACACACTTGCCAGGCAGAAAGCTGCATTTGTTCCTGCTTCTGAGAGTGCTCTGGATACCAGTTACTTCACTAGTCGCTACTCATGGAATACTTCTGATGGCCTTGTATATCCAGCCAGTGATGTTGAGGATTCTAGTGATGCTGATAGCTTAAGTGGCAGCAGTAGTTGCTTGAGCAATCGCCAAGATGAAGTGGGAGATGAATGTGGGGGTCTTGCTGAGTTTGATTCTGGCACATCTGTCAATTACTCTTTCAGTAATTTCTCCTTTAAGAACCTCTCCCAGCTTGCATCAATCAACTACGATCTCACTAAAGGATGGAAAGATGATCCTCCGACGAATTCTAGTGCATAG 3882 0.4549 MVFKGRFFSSKKSDSSSPDASSNSPRSFSSNSPSRSDKKKAKSAAHPTLAAGGGGGALAACRQTQVKDGTKKKDVVKGKESQTPPPEARKDSPVKKLTAAEGRESSVSPILASSLGLNRIKTRSGPLPQESFFGFRGEKGTTALGGSNLSRPGVGVRGGDGKKKEPANQNRVGFREGSHGGASATGGWGDNGSNSDSVSTLGSMPPREQSPVVLPRSRLQNGESSSEAAAGKQASSWAQSGGLRSADVCTPETAYDFENPKESESPRFQAILRVTSAPRKRFPSDIKSFSHELNSKGVWPFPFLKPRRLNNLEEILVVIRAKFDKAKEDVNSDLAIFAADLVGILEKNADTHPEWQETIEDLLVLARSCAMTSSGEFWLQCESIVQELDDRRQEHPPGMLKQLHTRMLFILTRCTRLLQFHKESGLAEDEPVFNLRQSRVLHSAGKCIPPSVGRDSKSSSAAKALKPSSKKAFSQEQSMMGWKKDVMQPENLSLPADDDNTKHFDSSGRDRMASWKKFPSPSGKSPKEAAQLKEQNYGRVESSKASINKRFPSDVDLSTAKPSEFLPIKDSLDHASKHQHKVSWGYWGDQQNNSEENSIICRICEEEVPTSHVEDHSRICAVADRCDQKGLSVNDRLVRIAETLEKMMESCSQKDTQQMVGSPDVAKVSNSSMTEESDVPSPKLSDWSRRGSDDMLDCFPETDNSAFMDDLKGLPLISCKTRFGPKSDQGMTTSSAGSMTPRSPLMTPRTSQIDLLLAGKGAYSEHDDLLQMNELADIARCVANAPLDDDRTTSYLLSCLDDLRVVVERRKFDALTVETFGTRIEKLIREKYLQLTEMVDVEKIDTESTVDDDVLLEDDVVRSLRTSPIHSSRDRTSIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILITVRNPFVVRFFYSFTCRENLYLVMEYLNGGDLYSLLRNLGCLDEEVARVYIAEVVLALEYLHSLHVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLSGPAVNGTSLLEEDEAADVFTSEDQWERRKKRSAVGTPDYLAPEILLGTGHAYTADWWSVGVILFELLVGIPPFNAEHPQTIFDNILNRKIPWPSVPAEMSPEAQDLIDRLLTEDPNQRLGSKGASEVKQHVFFKDINWDTLARQKAAFVPASESALDTSYFTSRYSWNTSDGLVYPASDVEDSSDADSLSGSSSCLSNRQDEVGDECGGLAEFDSGTSVNYSFSNFSFKNLSQLASINYDLTKGWKDDPPTNSSA* 1294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra1g0690 1293 MobiDBLite consensus disorder prediction 453 476 - -
Vra1g0690 1293 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1000 1012 IPR008271 GO:0004672|GO:0006468
Vra1g0690 1293 ProSiteProfiles Protein kinase domain profile. 881 1171 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra1g0690 1293 Gene3D Transferase(Phosphotransferase) domain 1 965 1189 - -
Vra1g0690 1293 PANTHER SERINE/THREONINE-PROTEIN KINASE 28 1291 - -
Vra1g0690 1293 ProSiteProfiles AGC-kinase C-terminal domain profile. 1172 1276 IPR000961 GO:0004674|GO:0005524|GO:0006468
Vra1g0690 1293 MobiDBLite consensus disorder prediction 187 206 - -
Vra1g0690 1293 Gene3D Phosphorylase Kinase; domain 1 879 1200 - -
Vra1g0690 1293 MobiDBLite consensus disorder prediction 9 32 - -
Vra1g0690 1293 PANTHER SERINE/THREONINE PROTEIN KINASE IREH1-RELATED 28 1291 - -
Vra1g0690 1293 MobiDBLite consensus disorder prediction 446 545 - -
Vra1g0690 1293 MobiDBLite consensus disorder prediction 725 747 - -
Vra1g0690 1293 Pfam Protein kinase domain 881 1171 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra1g0690 1293 SUPERFAMILY Protein kinase-like (PK-like) 878 1210 IPR011009 -
Vra1g0690 1293 MobiDBLite consensus disorder prediction 1221 1238 - -
Vra1g0690 1293 MobiDBLite consensus disorder prediction 650 681 - -
Vra1g0690 1293 MobiDBLite consensus disorder prediction 66 98 - -
Vra1g0690 1293 CDD STKc_MAST_like 887 1176 - -
Vra1g0690 1293 MobiDBLite consensus disorder prediction 214 243 - -
Vra1g0690 1293 SMART serkin_6 881 1171 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra1g0690 1293 MobiDBLite consensus disorder prediction 1216 1239 - -
Vra1g0690 1293 MobiDBLite consensus disorder prediction 496 512 - -
Vra1g0690 1293 Coils Coil 309 329 - -
Vra1g0690 1293 MobiDBLite consensus disorder prediction 1 245 - -
Vra1g0690 1293 MobiDBLite consensus disorder prediction 650 688 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra1g0690 Vra-Chr1 8109116 8123861 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra1g0690 1 1287 AGC Kinase Gene Family AT3G17850 65.512 0.0 1613
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_MAST Vra1g0690 Pkinase 6e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra1g0690 - - gmx:100776995 2237.61