Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra1g0650 ATGCACGCGAAAACAGACTCTGAGGTAACAAGCCTCGCCGCGTCCTCCCCCACGCGCTCCCCTCCTCGCCGCCCTCTCTACTACGTCCAGAGTCCGTCCAGGGACTCCCACGACGGCGAGAAGACCGCCACTACTTCGTTTCATTCCACCCCTGTTCTGAGCCCAGTTGCCTCTCCTCCTCACTCGCGCCAATCCTCCTCCACGCGCTTCTCCAAGAAGGATCACAGCCACAGTCTCAAGCCCTGGAAGCAAATCGATGTCATTGAAGAGGAAGGCCTTCTTCAAGGTGATGATCGCCGCAATGGGCTCTCTCGTCGCTGCTACTTTCTCGCCTTTGTTGTTGGTTTCCTGCTTCTCTTCTCCCTCTTCTCACTCATCCTCTGGGGGGCTAGTAGACCCATGAAGCCCAAGATCTCCGTCAAGAGCATAAAGTTTGATGATCTCAGAGTACAAGCTGGTTCAGATGCAACTGGTGTGACCACCGATATGATCACAATGAATTCCACTTTGAAATTCACATACCGAAACACAGGCACGTTTTTCGGGGTCCATGTCACAGCCACACCCGTGGAACTCTCCTATTCAGACATCGTAATTGCTTCAGGCGATATGAAGAAGTTTTATCAGTCTAGGAGGAGCCAAAGGTTGGTGAGTGTAGCAGTGATGGGTAACAAAATCCCTCTGTATGGAAGTGGTGCTAGCCTAAGTAGCACAACGGGTATGCCCACAGTGCCTGTGCCATTGAACCTAAAATTCGTGCTACGATCAAGGGCTTATGTGCTTGGGAAATTGGTGAAGCCTAAGTACTACAAAACCATTAAATGTTCCATCACTTTGGATCCCAAGAAGCTCACTTCTCCGGTTTCTCTCAAAAAATCTTGCATATATGATTGA 894 0.5034 MHAKTDSEVTSLAASSPTRSPPRRPLYYVQSPSRDSHDGEKTATTSFHSTPVLSPVASPPHSRQSSSTRFSKKDHSHSLKPWKQIDVIEEEGLLQGDDRRNGLSRRCYFLAFVVGFLLLFSLFSLILWGASRPMKPKISVKSIKFDDLRVQAGSDATGVTTDMITMNSTLKFTYRNTGTFFGVHVTATPVELSYSDIVIASGDMKKFYQSRRSQRLVSVAVMGNKIPLYGSGASLSSTTGMPTVPVPLNLKFVLRSRAYVLGKLVKPKYYKTIKCSITLDPKKLTSPVSLKKSCIYD* 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra1g0650 297 Pfam Late embryogenesis abundant protein 172 266 IPR004864 -
Vra1g0650 297 MobiDBLite consensus disorder prediction 43 66 - -
Vra1g0650 297 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 49 296 - -
Vra1g0650 297 PANTHER LATE EMBRYOGENESIS ABUNDANT PROTEIN 49 296 - -
Vra1g0650 297 MobiDBLite consensus disorder prediction 1 77 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra1g0650 Vra-Chr1 7658431 7660642 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra1g0650 - - gmx:100817451 518.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra1g0650 1 7658431 7660642 Vra1g0650 1 7658431 7660642 ECH
Vra7g3196 7 51610420 51615615 Vra1g0650 1 7658431 7660642 PCT