Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra1g0631 ATGTTCCGGAGACTCACTCTCTACTTTCTGTTCTCTGTAAGTGCAGCAACGCTTCTTCTTCCAACTACATGTGATGTGAACTTCAGCACTTCGACTATGCCTCTGGGTCAAAACCACTCAAAAATCCTAAACAAAGTTGATGATGTCGTCATGGGATGTGATGATAGAAAAAATTGCAGCAGGAGCGTGGAGAGTAATTCTGCCTACGTGTCACAACCTGTTAGTGGTACTAGCAATGTTTGTCGTCAATTTAAAAACCGAAATTGTGTGTCGTCACCAAATTTAAAGTCATTGTTGTCATCACCACCGCCACCACCTTCGTCACCGCCACCGCCACCACCTTCACCACCGCCACCACCATTATTACTACCACCAACACCATCGACACCTTCACCACAATCATCATCAATTTCATTACCACCACCAACATTTTCATCGACACCAACACCAGATCACGTATATAAGATAAATAACCACAAGGACGCAAGGATAATTATAATTATTATTATAGGTGTTGTAAGTGTTGTAATTGGAGGATGTTTCTTCATATTTTGTTGTGCTAGACGTAAGTCTTCAACCCGACTGTTCAAATTTCGTTTTACCAGAAACAATGATTCAAATATTGAAGCATTCTTAAGAAATCATGGAGCCATAGCACAGAAAAGATACAAATTTTCAGAAGTGAANAAAATGACTAATTCATTCNAAGTTAAACTTGGTCAAGGTGGTTTTGGTACAGTATACAAAGGAAAACTACTCACGGGTAGCCCTGTGGCTGTAAAGTTACTGAAAGCATCCAAAAGAAACGATGAAGAGTTCATCAATGAGGTTGCCAGCATCAGTAGAACATCCCATGTTAATATTGTCACACTTGTTGGATTTTGTTTGGAAGGCCCCAAAAAGGCTCTCATTTATGAGTTTATGGCTAATGGTTCTCTGGATAAGTTCATCTACAATAGAGGTCCAGAAAATATTGTATCTTTGACCTGGGAGAATTTATATCAAATTGCCATAGGAATAGCTCGAGGGTTGGAGTACTTGCACAGAGGCTGCAACACTAAAATTTTACATTTTGACATAAAGCCACATAATATTCTTTTGGATGAGAGTTTTTGTCCTAAAATATCAGATTTTGGACTAGCAAAGCTCTGTCCCAGGAATGAAAGCATTATTTCTGTGTCTGATGCAAGAGGAACAATGGGGTATTTAGCTCCTGAAATGATCAATAGACATTTTGGAAGAGTTTCACAAAAGTCTGATGTGTACAGTTATGGAATGATGCTACTGGAAATGGTAGGAGGAAGGAAGAACATTAATCCTGAAGCTAGTCATACGAGTGAGATATACTTCCCACATTTTGCATACAGAACGCTTGATGTGGATAATGAAGTGAGACCATATGAAGTGACGAATGCAGAAGAAGATGAGATTGCAAAGAGAATGACTGTAGTTGGCTTATGGTGCATTCAATCACTTCCAAATGATAGACCTACAATGAGCAGAGTGGTAGATATGTTGGAAGGTAACATGAATTCTTTGGAAATGCCTCCAAAACCTTTGTTTTCTTCTCCTACTAGATCACAACTCTTTCCTATGTATGCAAATCCATTGAAACTAAACATGTTCCGCAGATTCACTCTCTTATTTCTGTTCTCTGCAACTGCAGCAACGCTTCTTCTTCCAACTACATGTGATGTGAACTTCAGCACTTCGTCTATGCTTCTGGGTCAAAACCACTCAAAACTCGTAAACAAAGTCGGTGATCTCTTCATGGCGTGTGTTGGTAGAAAAAATTGCAGCAGCCCCCGCAGGAGTCTGACACAGACTGGTGTTATTAACTCGACTGTTGTTACTCACCAGAATTGCAACGGTAATCGAGCTTGTATTATCAAGGCATCATCGCAGGGATTCATATCGCCCGAGTCGACACCAGATTTAAAGTTACCACCGCCACCACGGTCACCGCCGAATTTAAAGTTACCGCCACCATCACCGCCAGATTTAAAGTTGGCGCCACGACGGTCACCGCCGCAATCATCACCACCACATACACGACGATCACGATCAGTTTCTTTACCACCAGGATCGGCACCAGTACCAGCGCCTGAATCAATGTTTTTCGGTGGAATTGGTGGAGATTTTGGTGATTCAGATGGCACATATAGCTCACAAGACGACCAGGTCAATTGGATAATTATAATTATAATTATTGTAGGTGTGGTAAGTGTTGTAATTGGAGGATGTTTCTTCATATTTTGTTGTGTTAGACGTAAGTCTTCAATCCGACTGTTCAAATTTCGTTTTACCAGAAACAATGATTCAAATATTGAAGCATTCTTAAGAAATCATGGAGCCATAGCACAGAAAAGATACAAATTTTCAGAAGTGAAAAAAATGACTAATTCATTCAAAGTTAAACTTGGTCAAGGTGGTTTTGGTACAGTATACAAAGGAAAACTACTCAGAGGTAGTCCTGTGGCCGTAAAGTTACTGAAAGCATCCAAAAGAAATGGTGAAGAGTTCATCAATGAGGTTGCCAGCATCAGTAGAACATCCCATGTTAATATTGTCACACTTGTTGGATTTTGTTTGGAAGGCTCCAAAAAGGTTCTCATCTATGAGTTTATGGCTAATGGTTCTTTGGATAAGTTCATCTACAATAGAGGGCCAGAAAATATTGTATCTTTGACCTGGGAGAATTTATATCAAATTGCCATAGGAATAGCTCGAGGGTTGGAGTACTTGCACAGAGGCTGCAACACTAAAATTTTACATTTTGACATAAAGCCACATAATATTCTTTTGGATGAGAATTTTTGTCCTAAAATATCAGATTTTGGACTAGCAAAGCTGTGTCCCAGGAATGAAAGCATTATTTCTGTGTCTGATACAAGAGGAACAATGGGGTATTTNGCTCCTGAAATGNTNAATAGACATTTTGGNNGAGTTTCACAAAAGTCTGATGTGTACAGTTATGGAATGATGCTACTGGAAATGGTAGGAGGAAGGAAGAACATTAATCCTGAAGCTAGTCANACGAGTGAGATATACTTCCCACATTTTGCATACGGAAGACTTGATGTGGATAATGATGTGAGACCATATGAAGTGATGAATTCAGAAGAAGATGAGATTGCAAAGAGAATGACTGTAGTTGGCTTATGGTGCATTCAATCACTTCCAAATGATAGACCTACGATGAGCGGAGTGGTAGAAATGTTGGAAGGTAACATGAATTCTTTGGAAATGCCTCCAAAACCTTTGTTTTCTTCTCCTACTAGATCAGAAACACAATCTTCCTCCCGAAATTAG 3312 0.3952 MFRRLTLYFLFSVSAATLLLPTTCDVNFSTSTMPLGQNHSKILNKVDDVVMGCDDRKNCSRSVESNSAYVSQPVSGTSNVCRQFKNRNCVSSPNLKSLLSSPPPPPSSPPPPPPSPPPPPLLLPPTPSTPSPQSSSISLPPPTFSSTPTPDHVYKINNHKDARIIIIIIIGVVSVVIGGCFFIFCCARRKSSTRLFKFRFTRNNDSNIEAFLRNHGAIAQKRYKFSEVXKMTNSFXVKLGQGGFGTVYKGKLLTGSPVAVKLLKASKRNDEEFINEVASISRTSHVNIVTLVGFCLEGPKKALIYEFMANGSLDKFIYNRGPENIVSLTWENLYQIAIGIARGLEYLHRGCNTKILHFDIKPHNILLDESFCPKISDFGLAKLCPRNESIISVSDARGTMGYLAPEMINRHFGRVSQKSDVYSYGMMLLEMVGGRKNINPEASHTSEIYFPHFAYRTLDVDNEVRPYEVTNAEEDEIAKRMTVVGLWCIQSLPNDRPTMSRVVDMLEGNMNSLEMPPKPLFSSPTRSQLFPMYANPLKLNMFRRFTLLFLFSATAATLLLPTTCDVNFSTSSMLLGQNHSKLVNKVGDLFMACVGRKNCSSPRRSLTQTGVINSTVVTHQNCNGNRACIIKASSQGFISPESTPDLKLPPPPRSPPNLKLPPPSPPDLKLAPRRSPPQSSPPHTRRSRSVSLPPGSAPVPAPESMFFGGIGGDFGDSDGTYSSQDDQVNWIIIIIIIVGVVSVVIGGCFFIFCCVRRKSSIRLFKFRFTRNNDSNIEAFLRNHGAIAQKRYKFSEVKKMTNSFKVKLGQGGFGTVYKGKLLRGSPVAVKLLKASKRNGEEFINEVASISRTSHVNIVTLVGFCLEGSKKVLIYEFMANGSLDKFIYNRGPENIVSLTWENLYQIAIGIARGLEYLHRGCNTKILHFDIKPHNILLDENFCPKISDFGLAKLCPRNESIISVSDTRGTMGYXAPEMXNRHFGXVSQKSDVYSYGMMLLEMVGGRKNINPEASXTSEIYFPHFAYGRLDVDNDVRPYEVMNSEEDEIAKRMTVVGLWCIQSLPNDRPTMSGVVEMLEGNMNSLEMPPKPLFSSPTRSETQSSSRN* 1104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra1g0631 1103 MobiDBLite consensus disorder prediction 92 152 - -
Vra1g0631 1103 ProSitePatterns Serine/Threonine protein kinases active-site signature. 923 935 IPR008271 GO:0004672|GO:0006468
Vra1g0631 1103 ProSitePatterns Protein kinases ATP-binding region signature. 807 829 IPR017441 GO:0005524
Vra1g0631 1103 CDD STKc_IRAK 239 508 - -
Vra1g0631 1103 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 166 527 - -
Vra1g0631 1103 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 735 1100 - -
Vra1g0631 1103 ProSiteProfiles Protein kinase domain profile. 801 1089 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra1g0631 1103 MobiDBLite consensus disorder prediction 1079 1103 - -
Vra1g0631 1103 PANTHER RUST RESISTANCE KINASE LR10-RELATED 166 527 IPR045874 GO:0004672
Vra1g0631 1103 PANTHER RUST RESISTANCE KINASE LR10-RELATED 735 1100 IPR045874 GO:0004672
Vra1g0631 1103 ProSitePatterns Serine/Threonine protein kinases active-site signature. 355 367 IPR008271 GO:0004672|GO:0006468
Vra1g0631 1103 MobiDBLite consensus disorder prediction 98 147 - -
Vra1g0631 1103 SUPERFAMILY Protein kinase-like (PK-like) 219 507 IPR011009 -
Vra1g0631 1103 MobiDBLite consensus disorder prediction 1084 1103 - -
Vra1g0631 1103 Gene3D Transferase(Phosphotransferase) domain 1 308 516 - -
Vra1g0631 1103 Gene3D Transferase(Phosphotransferase) domain 1 876 1084 - -
Vra1g0631 1103 Gene3D Phosphorylase Kinase; domain 1 197 307 - -
Vra1g0631 1103 Gene3D Phosphorylase Kinase; domain 1 766 875 - -
Vra1g0631 1103 SMART serkin_6 233 506 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra1g0631 1103 SMART serkin_6 801 1074 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra1g0631 1103 MobiDBLite consensus disorder prediction 640 704 - -
Vra1g0631 1103 CDD STKc_IRAK 807 1076 - -
Vra1g0631 1103 MobiDBLite consensus disorder prediction 644 679 - -
Vra1g0631 1103 Pfam Protein kinase domain 804 1071 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra1g0631 1103 Pfam Protein kinase domain 237 503 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra1g0631 1103 ProSiteProfiles Protein kinase domain profile. 233 521 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra1g0631 1103 SUPERFAMILY Protein kinase-like (PK-like) 786 1075 IPR011009 -
Vra1g0631 1103 ProSitePatterns Protein kinases ATP-binding region signature. 239 261 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra1g0631 Vra-Chr1 7310295 7332217 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra1g0631 128 521 Receptor kinase-like Gene Family AT4G18250 51.238 1.03e-117 377
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Vra1g0631 Pkinase 1.9e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra1g0631 - - vra:106779094 1949.87