Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vra1g0628 | ATGAGAGAGAGGGTTGTGAGGGAAGTGAGAAGAAGTGTGAGAATGGATGATAAACATACTCACATCCACACCTCTCCCCTTGCCTTCGCACTTACCGTCTCTTGCTTCTTCTGCATCGCTTTGCCACATTCTCACTCTCAACCATCGCCACCGCCATCGTCACCTCCACCGCCTTGTGCTGAGCCGTCATACATGTGCAGAATAAACGTTTCCGGCAACTTGGATCCTGTCTGGAAACAGATTCCTCCCTCTCAGTGTATCAGCTCTGACTCATCACCCCAGCTCAGCTGCTCTGCTTCTTATGAATCTCAAAATTTCACAGTGAAGAAGTTCAACAACTCCATTCACACCATGACGGTGGTGCCAGCACACACTGTCAACGATGTTTGTTCTCCTGATTTTTTTCACATTTACGACAACTTGAAGAACAGTCTGTTAAAGCATTATGAGTCAACGCGAAACGTCATAGTATTCTTCGATGGTTGTCCTCTCGACATCCCAAATTTCCCTTCAGAACGCAAATTTAAATGCGGGGATGCTGTGTACTATTTTAGGGGGCGGGATGAGACGTACGTACACACATCGCTTGAGTATTGCAAGAAAAGTTTGTTGGTGCCCATTGCCGCTCCTCTCGGTGATTACGATAATAAAGATGGTGGAGCTGAAGTTCTGAAAGAAGCTTTGAGGGATGGGTTTCAGATCTCCTATAGTCCTCCTCAACGTTGCAGAAGATGCACTGAAATTAACGGAAATTGCTGGAGCGGTGGTTATGGTTATAATGGAGATGTAGTTTCATGCAACTACTATTGCCCAAATCAATACTGTTCTCCCAAAAGCAAAAGTAATGGAAATTGGGACCAAAAGAGGAAATTCATTATTTTAGGTGTTACAGGTTCAGCAATTGCAGCGGTGTTGATATTATTTTCAATTCTGTGCGTAAGATACACGTCACCAACCTGGCAAGCAAATTTTGGGTTGGCTTCAAAAAGTAATCAAAATATCGAAGCATTCCTTAGAATTCATGGCCCTCTAGCTCTGAAAAGATATAAACTATCAGATGTTAAGAAAATGACCAACAACTTCAGAGTAAAGCTGGGACAAGGTGGTTTTGGTGCAGTATACAAGGGCAAGTTATCCAATGGTAGTGTTGTGGCNGTAAAGATGTTGAGTACATCCAAAAAGAATGGTGAAGAATTTGTGAATGAGGTTGCTAGCATCAGTCGAACTTCTCATGTTAACGTTGTCTCTCTTCTTGGATTTTGTTTGAAAGGTCACAAGAGAGCTCTCATCTATGAATTCATGTCCAATGGTTCCCTTGACAAATTCATTTACAGAACAAGAGATGAAACCCTTTCTGCCTTGAGTTGGGATATTATGTATCAAATTGCAAGGGACATAGCTCGAGGCTTAGAATACTTGCATAAGGGATGCAACACTCGAATTTTTCACTTTGACATAAAACCACATAACATTCTTCTGGATGACAACTTCTGTGCAAAGATATCTGATTTTGGGTTGGCAAAACTGTGTCCTAGGAATGAAAGTATCGTTTCCTTGTCAGATGCTAGAGGAACAATGGGGTATGTAGCTCCAGAGATGTGGAGCAGAAATCTTGGAAGAGTTTCGCATAAGTCTGATGTTTATAGTTATGGAATGATGCTGCTAGAGATGGTTGGAGGAAGGAAGAACATTAATGCCGAAGCAAGTCATACAAGTGAGATATACTTCCCACACTGGGCATACAATAAGCTTGAGTTGGAGAATGATTTGAGACCAGATATGGAGATGACAGCAGAAGAAAATGAGATTGTAAAGAGGTTGGCGATGGTGGGTTTATGGTGTACTCAAACGTTTCCTAATGATAGACCTACAATGAGCGAAGTGATAGATATGTTGGAAGGCAACATGGATTCCATACAAATCCCACCCAAACCTTTGCTTTCTTCTCCGACTAGATCAGTACCAGAGTATTCCATATCCTGA | 1983 | 0.4211 | MRERVVREVRRSVRMDDKHTHIHTSPLAFALTVSCFFCIALPHSHSQPSPPPSSPPPPCAEPSYMCRINVSGNLDPVWKQIPPSQCISSDSSPQLSCSASYESQNFTVKKFNNSIHTMTVVPAHTVNDVCSPDFFHIYDNLKNSLLKHYESTRNVIVFFDGCPLDIPNFPSERKFKCGDAVYYFRGRDETYVHTSLEYCKKSLLVPIAAPLGDYDNKDGGAEVLKEALRDGFQISYSPPQRCRRCTEINGNCWSGGYGYNGDVVSCNYYCPNQYCSPKSKSNGNWDQKRKFIILGVTGSAIAAVLILFSILCVRYTSPTWQANFGLASKSNQNIEAFLRIHGPLALKRYKLSDVKKMTNNFRVKLGQGGFGAVYKGKLSNGSVVAVKMLSTSKKNGEEFVNEVASISRTSHVNVVSLLGFCLKGHKRALIYEFMSNGSLDKFIYRTRDETLSALSWDIMYQIARDIARGLEYLHKGCNTRIFHFDIKPHNILLDDNFCAKISDFGLAKLCPRNESIVSLSDARGTMGYVAPEMWSRNLGRVSHKSDVYSYGMMLLEMVGGRKNINAEASHTSEIYFPHWAYNKLELENDLRPDMEMTAEENEIVKRLAMVGLWCTQTFPNDRPTMSEVIDMLEGNMDSIQIPPKPLLSSPTRSVPEYSIS* | 661 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vra1g0628 | 660 | ProSiteProfiles | Prokaryotic membrane lipoprotein lipid attachment site profile. | 1 | 35 | - | - | |
Vra1g0628 | 660 | MobiDBLite | consensus disorder prediction | 642 | 660 | - | - | |
Vra1g0628 | 660 | ProSiteProfiles | Protein kinase domain profile. | 359 | 647 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vra1g0628 | 660 | ProSitePatterns | Protein kinases ATP-binding region signature. | 365 | 387 | IPR017441 | GO:0005524 | |
Vra1g0628 | 660 | MobiDBLite | consensus disorder prediction | 641 | 660 | - | - | |
Vra1g0628 | 660 | Gene3D | Phosphorylase Kinase; domain 1 | 324 | 433 | - | - | |
Vra1g0628 | 660 | PANTHER | MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN | 282 | 660 | - | - | |
Vra1g0628 | 660 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 481 | 493 | IPR008271 | GO:0004672|GO:0006468 | |
Vra1g0628 | 660 | SUPERFAMILY | Protein kinase-like (PK-like) | 341 | 633 | IPR011009 | - | |
Vra1g0628 | 660 | CDD | STKc_IRAK | 365 | 634 | - | - | |
Vra1g0628 | 660 | SMART | serkin_6 | 359 | 639 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vra1g0628 | 660 | Gene3D | Transferase(Phosphotransferase) domain 1 | 434 | 641 | - | - | |
Vra1g0628 | 660 | Pfam | Protein tyrosine and serine/threonine kinase | 362 | 632 | IPR001245 | GO:0004672|GO:0006468 | |
Vra1g0628 | 660 | PANTHER | RUST RESISTANCE KINASE LR10-RELATED | 282 | 660 | IPR045874 | GO:0004672 | |
Vra1g0628 | 660 | Pfam | Wall-associated receptor kinase C-terminal | 191 | 267 | IPR032872 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vra1g0628 | Vra-Chr1 | 7273611 | 7284007 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vra1g0628 | 62 | 658 | Receptor kinase-like Gene Family | AT1G66910 | 37.838 | 5.11e-124 | 381 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRK10L-2 | Vra1g0628 | PK_Tyr_Ser-Thr | 6.1e-47 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vra1g0628 | - | - | gsj:114419144 | 683.715 |