Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra1g0611 ATGTACACATCAAGGAAGAAAATCCACAAAGATAAGGATGCTGAGCCAACTGAATTTGAGGAATCAGTTGGACAGGCATTCTTTGATCTTGAAAATACTAACAATGAGCTGAAAAGTGACCTGAAAGATTTATACATTAATTCAGCTGTCCAAATAGATGTTTCTGGGAACCGCAAGGCTGTGGTTATTCATGTCCCCTACAGATTAAGGAAGGGATTCAGGAAGATCCATGTCAGGCTTGTAAGAGAACTTGAGAAAAAATTTAGTGGGAAGGATGTAGTCCTGATTGCCACCAGGAGGATAGTGAGGCCACCAAAGAAAGGTTCTGCTGTTCAACGTCCTCGCAGCCGCACACTCACTGCTGTGCATGAGGCAATGCTGGAGGATATTGTATTACCTGCTGAGATTGTTGGAAAGCGTGTTAGGTATAAAATTGATGGTTCCAAGATTATGAAGGTGTTTTTGGACCCCAAGGAGAGAAACAACACTGAGTACAAGTTGGAGACTTTTGCTGCAGTATACAGGAAGCTTTCAGGCAAAGATGTTGTATTTGAATATCCTACATCTGAGGCTTAG 576 0.4201 MYTSRKKIHKDKDAEPTEFEESVGQAFFDLENTNNELKSDLKDLYINSAVQIDVSGNRKAVVIHVPYRLRKGFRKIHVRLVRELEKKFSGKDVVLIATRRIVRPPKKGSAVQRPRSRTLTAVHEAMLEDIVLPAEIVGKRVRYKIDGSKIMKVFLDPKERNNTEYKLETFAAVYRKLSGKDVVFEYPTSEA* 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra1g0611 191 PANTHER 40S RIBOSOMAL PROTEIN S7 2 188 IPR000554 GO:0003735|GO:0005840|GO:0006412
Vra1g0611 191 PANTHER 40S RIBOSOMAL PROTEIN S7 2 188 - -
Vra1g0611 191 ProSitePatterns Ribosomal protein S7e signature. 79 92 IPR000554 GO:0003735|GO:0005840|GO:0006412
Vra1g0611 191 Pfam Ribosomal protein S7e 7 186 IPR000554 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra1g0611 Vra-Chr1 7085657 7088008 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra1g0611 1 191 Cytoplasmic Ribosomal Protein Gene Family AT1G48830 76.440 1.21e-112 317
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra1g0611 1 7085657 7088008 Vra1g0611 1 7085657 7088008 ECH