Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra1g0594 ATGGGAAAAGCGAGGGACAGAACCGAGGATTTCAAAGATACCGTGCGCCGCACCGCTCACTCTTTGGGCTACGACGAGGCTAAAGTAGCGTCAATTATGGCATCTTTCATCATTCATAAACCGCCGCAAAGGTCTCCATTTTCCAAAGCCGCATTGAAGACGCTGGAGAGTATTGGAGAGCTGGATCAGTTTTTGTTGAAGCATAGAAAGGACTATACGGATCTGCATCGCACCACAGAAAAGGAAAGAGATAGCATCGAGCATGAAGTTAGTACTTTTATTAAAACATGCCAGGAACAAATTGATATTCTTAAGAATAGTATAAATCAAGAAGAGGAAACTTCCAAAGGTTGGCTTGGCATTGCGACTACAAAATCTAATGCCGATGTGATTGCCCACAAACATGGGGTGGTTCTAATTTTAAGTGAGAGACTCCATACAGTCACTGCACAGTTTGATCAGCTAAGAGCTGTACGCTTCCAGGACGCTATTAATAAAGCAATTCCACGGAGAAAACTTAACCGTGTAACCAGAAAAGATTCTGCAGAAACCTCAAAACCAGATGGCATGGAGCTCAGAGAACCCGAAGAGTTACGTGCTGAGCCTCTACGAGTCCAGCAACAACTCTTGGACGATGAAACACGTGCCCTGCAGGTGGAATTGACTAATCTTCTCGATACAGTTCAAGAAACCGAAACTAAGATGGTGGAAATGTCTGCACTAAATCACCTCATGTCTACTCATGTTTTGCAGCAAGCTCAGCAAATTGAGCATCTTTATGAGCAGGCTATTGAAGCCACTAAGAATGTTGAGCTCGGTAACAAAGAACTCTCACAAGCCATTCAGCGGAATAGCAGCAGCAGGACATTTCTTTTACTGTTTCTATTTGTGCTTACTTTTTCAATCCTCTTTCTTGATTGGTATAGTTAA 930 0.4301 MGKARDRTEDFKDTVRRTAHSLGYDEAKVASIMASFIIHKPPQRSPFSKAALKTLESIGELDQFLLKHRKDYTDLHRTTEKERDSIEHEVSTFIKTCQEQIDILKNSINQEEETSKGWLGIATTKSNADVIAHKHGVVLILSERLHTVTAQFDQLRAVRFQDAINKAIPRRKLNRVTRKDSAETSKPDGMELREPEELRAEPLRVQQQLLDDETRALQVELTNLLDTVQETETKMVEMSALNHLMSTHVLQQAQQIEHLYEQAIEATKNVELGNKELSQAIQRNSSSRTFLLLFLFVLTFSILFLDWYS* 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra1g0594 309 PANTHER SYNTAXIN-18 5 309 - -
Vra1g0594 309 PANTHER SYNTAXIN-18 5 309 - -
Vra1g0594 309 SUPERFAMILY t-snare proteins 57 273 IPR010989 GO:0016020|GO:0016192
Vra1g0594 309 Coils Coil 94 114 - -
Vra1g0594 309 Pfam SNARE-complex protein Syntaxin-18 N-terminus 6 86 IPR019529 -
Vra1g0594 309 Gene3D - 212 306 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra1g0594 65 309 SNARE and Associated Proteins AT1G51740 72.764 9.09e-112 322
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra1g0594 K08492 - gmx:100801587 550.821