Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra1g0593 ATGCCGGACGTTCAGACCCTTGTCAATGATTTTGTGAACAAGCTTAAGAAACGTAAAATTGAAGGTTCACAGGCCACAGCAAAGCTCACAGCAGAGTTGCTCCGGTCTGTGATATCACAGCAGCGGGTGCCACACACAAACCAGGCCACAGCTCTGATTCATGCAGTAAGGGCTATTGGGGAGCAGCTTATTGCTGCCAATCCTGTTGAGCTAGCTGTGGGAAATATTGTGAGGCGTGTTCTGCACATTATAAGGGAAGAGGATCTTTCCCTTGCAACAGCTGCTATGGCTGGTTTGGGGGTATCAGTTGCAAGTGACGATGAAGATGATGAGGAGCGAGATGAAAATCCTGTTTTATCTGCTGCTGCTGTAGCAGCTGCTGCTAGAAGTACATTACGTCCACCGTCATTACAAACTCTTCTAGAGGATACGTCTGATTCAGCTGCCGCTCCGCACACATCTTCCTCTGGGGGTGAATCTGACGGGAGAAGTAGATCTATTGAGAAAGGTTCAAGAGTTAGGAAGTTGAAACATGATGTCATTGAAGCAGTTAATGAACTAATTCAAGACATATCTACTTGCTATGAACAAATAGCTGAGCAGGCAGTGGAGCACATTCACCACAATGAGGTAATTTTAACGTTAGGCAGCTCAAAAACAGTTTTGGAATTTCTTTATGCTGCGAAGGAAAAGCAAAGATCATTTAAGGTCTTTGTTGCTGAAGGTGCCCCAAGATACCAAGGACATATCCTTGCAAAAGAATTGGCTGCCAGAGGCTTACAGACCACAGTAATTTCTGATTCTGCCGTTTTTGCATTGATTTCCCGAGTGAACATGGTTATAGTTGGAGCTCATGCTGTCATGGCTAATGGTGGAGTTATTGCCCCAGTTGGGTTAAATATGGTTGCACTTGCAGCTCAAAGGCATGCTGTTCCATTTGTTGTACTTGCTGGGAGTCACAAGTTGTGTCCTTTGTATCCACACAATCCTGAAGTCCTTCTTAATGAACTGAGATCCCCGTCTGAGCTACTTGACTTTGGGGAATTCTCAGATTGCATGGATTCTGCAAGCGGTGCTGGTTCTCTTCATGTTGTCAATCCAACCTTTGATTATGTGCCGCCAAAATTTGTTAGTCTATTTATTACTGACACGGGAGGGCACAACCCGTCATATATGTACCGGCTCATAGCTGATTACTATTCAGCCGATGATTTGGTGGTGAAACGAAGACCTATTACAGGGAGTTGA 1248 0.4487 MPDVQTLVNDFVNKLKKRKIEGSQATAKLTAELLRSVISQQRVPHTNQATALIHAVRAIGEQLIAANPVELAVGNIVRRVLHIIREEDLSLATAAMAGLGVSVASDDEDDEERDENPVLSAAAVAAAARSTLRPPSLQTLLEDTSDSAAAPHTSSSGGESDGRSRSIEKGSRVRKLKHDVIEAVNELIQDISTCYEQIAEQAVEHIHHNEVILTLGSSKTVLEFLYAAKEKQRSFKVFVAEGAPRYQGHILAKELAARGLQTTVISDSAVFALISRVNMVIVGAHAVMANGGVIAPVGLNMVALAAQRHAVPFVVLAGSHKLCPLYPHNPEVLLNELRSPSELLDFGEFSDCMDSASGAGSLHVVNPTFDYVPPKFVSLFITDTGGHNPSYMYRLIADYYSADDLVVKRRPITGS* 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra1g0593 415 SUPERFAMILY NagB/RpiA/CoA transferase-like 5 404 IPR037171 -
Vra1g0593 415 PANTHER BNAA01G32370D PROTEIN 8 55 - -
Vra1g0593 415 PANTHER BNAA01G32370D PROTEIN 55 407 - -
Vra1g0593 415 MobiDBLite consensus disorder prediction 143 161 - -
Vra1g0593 415 MobiDBLite consensus disorder prediction 143 171 - -
Vra1g0593 415 Gene3D - 194 399 IPR042529 -
Vra1g0593 415 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT BETA 8 55 - -
Vra1g0593 415 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT BETA 55 407 - -
Vra1g0593 415 Pfam Initiation factor 2 subunit family 19 389 IPR000649 GO:0044237
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra1g0593 Vra-Chr1 6942643 6949038 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra1g0593 1 407 Eukaryotic Initiation Factors Gene Family AT3G07300 80.440 0.0 632
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra1g0593 K03754 - gmx:100778545 756.518