Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra1g0582 ATGTTCCATCTAACACTACTCATTCTCCTAGCCACCCTAGTCTCGTTAATCTACATCCTACTCACCACCGCGCCACGGCGGAGACAGCCACCGCCTCCCCCGGGGCCACCGCGGTTACCGATAATCGGAAACCTCCACTTGATGGTAGGAGGAAGAGAACCACTCCTACATCGTTCGCTTCAATCCCTGTCCCAACGTTACGGTCCTATAATGTCGTTACAACTGGGAAACGTTCCGACCGTTGTGGTCTCGTCTCCGGAGGCCGCGGAACTGTTCCTCAAAACCCACGACGCTGTCTTCGCGAACAGGCCCAAGTTCGAAGCGGCCCAATACACGTACGGCCCAGAGAGCGTGGCGTTTGCAGAGTACGGCGAGTACTGGCGCGGCGTGAGGAAGGTGTGCACCACGCACCTGCTGAGCGCGTCGAAGGTGGAGCGGTTTGCGCCTTTGAGAAAGAGGGAGGTTGGGGCGATGGTGGAGTGGTTGAGGGAAGCGGCGGCGGCGCGTGAGGTTGTGAACCTCAGTGAGCGAGTGGGGGAAGTTTTGATTGACATGGCATGTAAGATGGTGCTGGGAAGGAACAAGGATCATAGATTTGACTTGAAAGGGATTCTTTTGGAGACAATGAGCGTTTCAGGAGCTTTCAATTTGGCAGATTATTTGCCTTGGTTTCGACCCTTTGATCTTCAGGGATTAACACAACGATCAAAGAAAATCAATAAAGCGCTTGATGAAATGTTGGAGGAGATTATCGAAGAACACGAAGTGGTTCCTAAAGCAGAAGGGCACCTTAACGATTTCATTGACACACTACTTTCGTTGAAAGACCAACCAATGCATCGACATGTTGAAGATGCACCTATGATCGATAAAAGAAGCATAAAGGGTATTGTGTTTGACATGGTAATCGGTGCATCAGAAACTTCGAGCAACGTGATTGAATGGGCCATTTCAGAACTGGTGCGACATCCAAGAGTGATGGAAAGTGTTCAAGACGAGCTGAAAGATGTGGTTGGAATGAAGAAGATGGTGGAGGAGATTGATTTGGCAAAACTAAGTTATCTGGATATGGTTGTGAAGGAGACCCTAAGGCTTCACCCTGCTGTGCCCTTACTAGCACCTCATGAATCAATGGAGGATATAGTGATAGAAGGCTATTACATCAAGAAGAAGTCACGAATAATAATAAATGCATGGGCCATAGGGAGAAACCCTACAGTGTGGTCGGAAAATGCTCATGTTTTTTTCCCTGAAAGATTTGTCGACAGCAACATAGATTTTAAGGGACAAGACTTTCAACTTATACCGTTTGGGTCTGGTCGGAGAAGCTGTCCAGGAATGATGATGGGTTTGAGCATAGTTAAATTGGTTATAGCACAATTGGTGCACTGCTTCAACTGGGAGTTACCTTATGGCATTGCTCGCCATGAATTAGATATGAATGAGAAATCAGGCTTATCAATGCCACGAGCAACACCTTTGCTTCTCATTCCAACTTATCGTCTACTTTATCAAACTTTAGTGAATTGA 1530 0.4752 MFHLTLLILLATLVSLIYILLTTAPRRRQPPPPPGPPRLPIIGNLHLMVGGREPLLHRSLQSLSQRYGPIMSLQLGNVPTVVVSSPEAAELFLKTHDAVFANRPKFEAAQYTYGPESVAFAEYGEYWRGVRKVCTTHLLSASKVERFAPLRKREVGAMVEWLREAAAAREVVNLSERVGEVLIDMACKMVLGRNKDHRFDLKGILLETMSVSGAFNLADYLPWFRPFDLQGLTQRSKKINKALDEMLEEIIEEHEVVPKAEGHLNDFIDTLLSLKDQPMHRHVEDAPMIDKRSIKGIVFDMVIGASETSSNVIEWAISELVRHPRVMESVQDELKDVVGMKKMVEEIDLAKLSYLDMVVKETLRLHPAVPLLAPHESMEDIVIEGYYIKKKSRIIINAWAIGRNPTVWSENAHVFFPERFVDSNIDFKGQDFQLIPFGSGRRSCPGMMMGLSIVKLVIAQLVHCFNWELPYGIARHELDMNEKSGLSMPRATPLLLIPTYRLLYQTLVN* 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra1g0582 509 PRINTS P450 superfamily signature 304 321 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra1g0582 509 PRINTS P450 superfamily signature 357 368 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra1g0582 509 PRINTS P450 superfamily signature 435 444 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra1g0582 509 Pfam Cytochrome P450 33 489 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra1g0582 509 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra1g0582 509 PRINTS E-class P450 group I signature 88 109 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra1g0582 509 PRINTS E-class P450 group I signature 293 310 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra1g0582 509 PRINTS E-class P450 group I signature 313 339 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra1g0582 509 PRINTS E-class P450 group I signature 356 374 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra1g0582 509 PRINTS E-class P450 group I signature 434 444 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra1g0582 509 PRINTS E-class P450 group I signature 444 467 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra1g0582 509 Gene3D Cytochrome P450 19 495 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra1g0582 509 SUPERFAMILY Cytochrome P450 33 501 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra1g0582 509 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 437 446 IPR017972 GO:0005506|GO:0016705
Vra1g0582 509 PANTHER CYTOCHROME P450 FAMILY PROTEIN 13 503 - -
Vra1g0582 509 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 13 503 - -
Vra1g0582 509 Coils Coil 229 249 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra1g0582 Vra-Chr1 6840986 6842814 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra1g0582 4 499 Cytochrome P450 AT3G48280 37.952 2.94e-123 368
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra1g0582 - - gmx:100798918 782.711
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra1g0582 1 6840986 6842814 Vra1g0582 1 6840986 6842814 ECH