Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra1g0581 ATGTTTCCTGAAACACTAGCTATTCCTGCAATACTCCTTGTGGTATTCATATTTGTTGTATCAGTTGCTGTGTTGAAAGCAAAACAAGGCCAAGATAATGGAAAACATCCACCTGGTCCCAAGCCCCTGCCAGTTATTGGTCATCTCCACATGCTAGGGAAATTACCACACCGCACCCTTCAATCCCTTGCAGCAAAATATGGACCTATAATGTCCTTAAAGCTAGGACAGGTTCCAACCATTGTGATATCTTCACCAGAAACAGCTGAACTATTCCTCAAGACTCATGACATTACTTTTGCTTCCAGGCCTAAAAGCATCTCATCCCATTATATTTCCTATGGTGGTAAAGGCTTAGTTTTTTCTGAGTATGGTCCCTACTGGCGCAACATGAGGAAACTCTGCACAGTACAACTTCTGATTGCATCAAAAGTTGAGATGTATTCTCCTTTGAGAAGTGAGCTGTTGACAGAGTTTGTCTGCTTTCTGCAGAAGACAGCATCATCACATGAGGTTACGGATGTCAGTGATACTGTAGGGGATCTCATTGAGAATCTCACCTTTAAAATGATCTTTGGTCGCAGTAAGGACGATAGATTCGATGTAAAGAACCTTGTTCGAGAGGTACTGAACTTGGCAGGAACTTTCAATGTTGCAGATTACTTGCCTTGGCTACGCATGTTCGACCTTCAGGGACTAGTAAAACGATTAAAGAAAGCGAGTAAATCATTTGACGTAGTCATGGAGCAGATTATCAAAGACCACGAACAGTATTCTGATAAAGAACAAAAGGGCCAAAAGGATTTTGTGGACATATTACTTGCACTTCTGCATCAACCCCTGGATCCTCAGGATGAACATGGTCCGGTGATTGAAAGAACACATATCAAGGCTATTGTGATGACTATGATTATTGCAGGAGTTGACACATCTGCCACAACGGTTGAGTGGGCCATGTCAGAACTCTTAAAGCATCCAAGGGTGATGAAGAAACTTCAAGATGAGTTGGAAAGTGTGGTGGGGATAAGTAGAAAGGTGGAGGAAACTGATATGGAAAAGTTGACTTATTTGGACTTAGTTGTGAAGGAGACACTAAGGTTGTACCCTGTTGCACCTTTGCTGGTACCTCGTGAGTGTAGAGAAGATGTTACTATAAATGGTTACTGCATAAAGAAAAAGTCAAGGGTGATAGTGAATGCATGGGCTTTGGGGAGAGATTCTAAAGTTTGGTCAGATAATGCTGAGGAGTTTTGTCCTGAAAGATTTTCCAATAGCAATGTGGACATAAAAGGATTTGACTTTAGACTCATACCATTTGGTTCAGGTCGCAGAGGGTGCCCTGGGATTCATTTGGGTCTCACCACTGCTAAGATTGTTCTGGCTCAATTGGTTCATTGCTTCAATTGGGAGCTTCCTTTGGGCATGTCCCCTGATCAATTGGACATGACTGAGAAATTTGGTCTTACAATGCCAAGAAGTAAGCATTTGCTAGCTGTGCCAACTTATCGCCTAGCAGATGAAATTGGAAAGCAATAA 1536 0.4212 MFPETLAIPAILLVVFIFVVSVAVLKAKQGQDNGKHPPGPKPLPVIGHLHMLGKLPHRTLQSLAAKYGPIMSLKLGQVPTIVISSPETAELFLKTHDITFASRPKSISSHYISYGGKGLVFSEYGPYWRNMRKLCTVQLLIASKVEMYSPLRSELLTEFVCFLQKTASSHEVTDVSDTVGDLIENLTFKMIFGRSKDDRFDVKNLVREVLNLAGTFNVADYLPWLRMFDLQGLVKRLKKASKSFDVVMEQIIKDHEQYSDKEQKGQKDFVDILLALLHQPLDPQDEHGPVIERTHIKAIVMTMIIAGVDTSATTVEWAMSELLKHPRVMKKLQDELESVVGISRKVEETDMEKLTYLDLVVKETLRLYPVAPLLVPRECREDVTINGYCIKKKSRVIVNAWALGRDSKVWSDNAEEFCPERFSNSNVDIKGFDFRLIPFGSGRRGCPGIHLGLTTAKIVLAQLVHCFNWELPLGMSPDQLDMTEKFGLTMPRSKHLLAVPTYRLADEIGKQ* 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra1g0581 511 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra1g0581 511 PRINTS E-class P450 group I signature 88 109 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra1g0581 511 PRINTS E-class P450 group I signature 295 312 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra1g0581 511 PRINTS E-class P450 group I signature 315 341 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra1g0581 511 PRINTS E-class P450 group I signature 358 376 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra1g0581 511 PRINTS E-class P450 group I signature 436 446 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra1g0581 511 PRINTS E-class P450 group I signature 446 469 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra1g0581 511 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 7 505 - -
Vra1g0581 511 PANTHER CYTOCHROME P450 FAMILY PROTEIN 7 505 - -
Vra1g0581 511 SUPERFAMILY Cytochrome P450 37 503 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra1g0581 511 PRINTS P450 superfamily signature 306 323 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra1g0581 511 PRINTS P450 superfamily signature 359 370 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra1g0581 511 PRINTS P450 superfamily signature 437 446 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra1g0581 511 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 439 448 IPR017972 GO:0005506|GO:0016705
Vra1g0581 511 Pfam Cytochrome P450 37 495 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra1g0581 511 Gene3D Cytochrome P450 22 501 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra1g0581 Vra-Chr1 6835928 6839743 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra1g0581 11 501 Cytochrome P450 AT3G26300 39.880 1.45e-130 387
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra1g0581 - - gmx:100798918 841.647
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra1g0581 1 6835928 6839743 Vra1g0581 1 6835928 6839743 ECH