Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra1g0533 ATGGCCACCATTCCTCACCAATGGAATACCTTTTCACTCTCTCTCCTCATTCTCTCCGTCACCCTCTTCCAAAACCTAACCCCCAATTCCTCTCCTCCCCCTCCCAATTACATCGTTGCCTTCCGCCACTACGCCGCCGTCGACAGCCACCGCGCCTACCTCGAATCCGCCCTCCGCCCTGAGGGATGGCGCTGGATCCCGCGCCAGAACCCGGCGGCGCAGTTCCCAACTGATTTCGGGCTGGTGGCCATCGAGGATTCCGGGGTGGTAGACGAGATTCGGAAACTGGGGTCGGTTAAATACGTGAGCTTGGACGCGAGCTACAAGAGGGGTTTGATGACGATGGATCAGAGACGCAACAAGAAGGTTGGGGCGTTCGAGGATGGGACGAAGAAGCGCCCCGGTAAGATCTTCACTGCGATGTCGTTTTGCGAGGCCGAAGAAGATGAAAAAAGTGTTGGCAATCACAGCAGTTCCATCAAGTGGGGGCGAGAATTGATGATGCAGAGATCACAAGTTACTTCAATGTTTGGGGCTGAGGATCTCTGGGCGAAAGGGTACACTGGTGCCAAGGTCAAGATGGCTATATTTGATACTGGCATTCGGGCTGATCACCCTCATTTTCGTAACATCAAGGAGCGTACTAATTGGACCAATGAAGATACGTTGAATGATAATCTTGGACATGGGACTTTTGTTGCGGGTGTAATTGCTGGTGTAGATTCTGAGTGCCTTGGTTTTGCACCAGACACAGAGATTTATGCATTTCGGGTGTTCACTGATGCACAGGTATCATATACATCATGGTTCCTTGATGCCTTCAACTATGCAATTGCAACCAATATGGATGTGTTAAATTTGAGCATAGGTGGACCTGATTACTTGGATCTCCCGTTTGTTGAAAAGATATGGGAGATAACAGCAAATAATATAATCATGGTTTCTGCAATTGGAAATGATGGACCACTTTATGGAACTTTGAACAATCCAGCTGATCAAAGTGATGTTATTGGTGTTGGTGGTATTGACTATAGTGACCATATAGCCTCCTTTTCCTCACGTGGCATGAGTACGTGGGAGCTTCCTCATGGTTATGGCCGTGTAAAGCCAGACATAGTTGCATATGGACGGGACATTATGGGATCAAAAATTAGTGCAGGCTGTAAAAGCTTATCAGGAACTAGTGTTGCAAGTCCTGTAGTTGCTGGTGTTGTATGTTTGCTTGTCAGTGTCATTCCTGAATCTGAGAGAAAAAGTATCTTAAACCCAGCAAGCATGAAACAAGCATTGGTTGAGGGTGCTGCAAAGCTTTCTGGGCCTAACATGTATGAGCAGGGTGCTGGCAGAGTTGATCTGTTAGCATCGTATGAGATTCTTAAGAGCTACAAACCTAGGACGAGCATATTTCCCAGTGTTCTTGATTATACAGATTGTCCTTACACATGGCCATTTTGTCGTCAGCCACTCTATGCAGGTGCCATGCCTGTCATCTTCAATGCCACCATTTTGAATGGAATGGGTGTGATTGGATACATTGAAAGTCCACCAACATGGCACCCTTTTGATGAAGAAGGGAATCTTCTAAGCATACATTTTACTTATTCGGAGATAATTTGGCCTTGGACTGGTTATTTGGCTCTTCACATGCAGATCAAGGAAGAAGGTGCACAGTTTTCTGGTAAGATTGAAGGTAATGTAACTCTTAAGGTTTCTAGCCCTCCAGCTCAAGGAGAGAAGGACCCTCAAGTTAGCATTTGTGTGCTTCAATTAAAATTAAAAGTGGTACCAACACCACAACGATCTAAACGAATTTTGTGGGATCAGTTTCACAATATCAAATACCCACCTGGATATATTCCTAGAGATTCCTTGGACGTTCGTAATGACATTCTTGATTGGCACGGGGATCATCTACATACAAATTTTCACATCATGTTCAACATGTTACGAGATGCTGGTTACTATATTGAAACACTTGGTTCTCCTCTTACATGTTTTGATGCTCGGCATTATGGTACACTTTTGTTGGTGGATCTTGAGGATGAGTACTTTCCTGAGGAGATTGAAAAACTAAAAGATGATGTTGTAAATACTGGATTGGGATTAGCTGTCTTTGCTGAGTGGTATAATGTAGATTCCATGGTAAAGATGAGATTCTTTGATGACAATACACGGAGCTGGTGGACGCCAGTCACTGGAGGTGCTAACATTCCTGCACTTAATGATCTTTTGGCTCCATTTGGGATTGCTTTTGGAGATAAGATTTTGAGTGGTGATTTTTCACTTTTGGGTGAGCAGAATCGATATGCATCTGGGACAAATATAGTGAGGTTTCCAAGGGATGGTTATGTGCATAGCTTTCCCTTAGATAGTTCAGAAAATGGAGCCACACAGAGTGTACTGCTAACTTCTGGCTCAACCAAGGCAGATTCTCCAATTCTTGGTCTCGTGGTAATGGGCGAAGGTCGCATAGCTGTGTATGGAGACTCCAATTGTTTGGATAGCAGTCATATGATAACAAATTGTTTTGCCCTTTTGAGGAAAATACTGGATTTTACCAGTGAAGATGTTAGAGATCCAACACTTTTCTCCGATTCAATTAAACAAGACTCTCCTTTATATGAAGCTGACAATCGATTGCCATCCCGCAGAACTGATGTAAATTTCTCTGCATATTCAGCTATTGTGGATAAGGAATTGATCTGTGGGACTGACACAAGATTTGAAATTTGGAAAACTAAAGGTTACAACTTGCAAGTAAGAGGAAGAAATAGAAGACTGCCCGGTTATCCTATCATTGATTTGGGAAGGGGTTTCAATTCATCCTCTGGCACTTCTAACATTAAGCAAACCAAGTTGAACGTAAGAAGAAAGGATGATTCTCTGGGGAACAGGTACTTGGGCCTGTTCTATGGAGATGAGCCTGATGCACCTGTGTTGGTTGTTGGTCATTGGTTGGTTCCTTTTGTTGTTGCATTAACTGGTATTTTGCTATTGAGTTTTTGGCGCATTCGTCAAAAGAGGCGAAGACGAAGAAAAGGATCAAGTTCTGGTAGATTGGCCAATATAGTTTAG 3075 0.4384 MATIPHQWNTFSLSLLILSVTLFQNLTPNSSPPPPNYIVAFRHYAAVDSHRAYLESALRPEGWRWIPRQNPAAQFPTDFGLVAIEDSGVVDEIRKLGSVKYVSLDASYKRGLMTMDQRRNKKVGAFEDGTKKRPGKIFTAMSFCEAEEDEKSVGNHSSSIKWGRELMMQRSQVTSMFGAEDLWAKGYTGAKVKMAIFDTGIRADHPHFRNIKERTNWTNEDTLNDNLGHGTFVAGVIAGVDSECLGFAPDTEIYAFRVFTDAQVSYTSWFLDAFNYAIATNMDVLNLSIGGPDYLDLPFVEKIWEITANNIIMVSAIGNDGPLYGTLNNPADQSDVIGVGGIDYSDHIASFSSRGMSTWELPHGYGRVKPDIVAYGRDIMGSKISAGCKSLSGTSVASPVVAGVVCLLVSVIPESERKSILNPASMKQALVEGAAKLSGPNMYEQGAGRVDLLASYEILKSYKPRTSIFPSVLDYTDCPYTWPFCRQPLYAGAMPVIFNATILNGMGVIGYIESPPTWHPFDEEGNLLSIHFTYSEIIWPWTGYLALHMQIKEEGAQFSGKIEGNVTLKVSSPPAQGEKDPQVSICVLQLKLKVVPTPQRSKRILWDQFHNIKYPPGYIPRDSLDVRNDILDWHGDHLHTNFHIMFNMLRDAGYYIETLGSPLTCFDARHYGTLLLVDLEDEYFPEEIEKLKDDVVNTGLGLAVFAEWYNVDSMVKMRFFDDNTRSWWTPVTGGANIPALNDLLAPFGIAFGDKILSGDFSLLGEQNRYASGTNIVRFPRDGYVHSFPLDSSENGATQSVLLTSGSTKADSPILGLVVMGEGRIAVYGDSNCLDSSHMITNCFALLRKILDFTSEDVRDPTLFSDSIKQDSPLYEADNRLPSRRTDVNFSAYSAIVDKELICGTDTRFEIWKTKGYNLQVRGRNRRLPGYPIIDLGRGFNSSSGTSNIKQTKLNVRRKDDSLGNRYLGLFYGDEPDAPVLVVGHWLVPFVVALTGILLLSFWRIRQKRRRRRKGSSSGRLANIV* 1025
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra1g0533 1024 ProSitePatterns Serine proteases, subtilase family, serine active site. 393 403 IPR023828 -
Vra1g0533 1024 PRINTS Subtilisin serine protease family (S8) signature 189 208 IPR015500 -
Vra1g0533 1024 PRINTS Subtilisin serine protease family (S8) signature 225 238 IPR015500 -
Vra1g0533 1024 PRINTS Subtilisin serine protease family (S8) signature 392 408 IPR015500 -
Vra1g0533 1024 PANTHER MEMBRANE-BOUND TRANSCRIPTION FACTOR SITE-1 PROTEASE 35 850 - -
Vra1g0533 1024 PANTHER PEPTIDASE S8 35 850 - -
Vra1g0533 1024 Pfam Subtilase family 190 439 IPR000209 GO:0006508|GO:0008236
Vra1g0533 1024 ProSitePatterns Serine proteases, subtilase family, histidine active site. 229 239 IPR022398 -
Vra1g0533 1024 CDD Peptidases_S8_SKI-1_like 183 439 IPR034185 -
Vra1g0533 1024 SUPERFAMILY Subtilisin-like 171 452 IPR036852 GO:0004252|GO:0006508
Vra1g0533 1024 ProSiteProfiles Serine proteases, subtilase domain profile. 161 456 - -
Vra1g0533 1024 Gene3D Peptidase S8/S53 domain 157 455 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra1g0533 Vra-Chr1 6249629 6255165 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra1g0533 263 1021 Subtilisin-like Serine Gene Family AT5G19660 78.357 0.0 1220
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra1g0533 K08653 - gmx:100819188 1862.04