Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra1g0524 ATGTATAAACCATTCATGACATGTGATGATCCAAAAGGGGTAGTTGAGTGTGGGGCTATAAGAAAATACAGGACCAGTTCTCAGAAAATGAAGGACAAGACAAAAACTAGGAGGCCGGCTGAGACATCATTGGCTAACAAACAAGACAAAGAGGAGAAGGTTTCAAAAGGATCCGCTGAGAGGTCTTTTGATCCATCATCCTTGCAGCTCATGGAGGTTTCTAGAGGGGCTCAAAGGTTGAACAACATGATTGATTCATGGTCTAGGGGTCTTATGTATGATGGAAGTTCTGAAGATATAGCAAAAGATTTGCTAAAAGGGGCTCTTGACCTGCAAGAATCTCTACTGATGCTTCGCAAGGTGCAAGAAGCTTCACAACACATGGCTACCCTGAAGAGAAGACAAAATGGGAAACCTGAAAGCAGCAGATTTGATGCAATGCCGGTTGATGGAACTGCACATTGTGATCACTTTGGTGAACAAAGTTATCCAATGGGGTTCCGAAGACGTTGGCCTTCAGCTGATGGTTCTTCAAGTAGCTGCACCGAGGAGCTTAAGAAAGTGATTAAGGAGAGCCTGGTTAGTCAAAATTTGTTCAAAACCACTGAAGGGTTGGATTCATCATCCACATTCCACTCAACAAACTCAAGCCAATCTTCTGGTGCTTGGAATGATAAGCTTTCTGATTCTTCTTTCTCACCAACAACTTCAAGGAGGGAAAGACGATCCAATCTGGTTGCCAAGCTGATGGGTTTAGAAGAAGCCCCTTCAAGATCATTCCCAGCTATTATACAGAAACAGCTGGCGAGTCCAAAGATTCTGAATCAGAAGAGACATGTATTTGACATAGATATGCCTAAGGTGAGAAAAAATGTTGAGAATGTTAGTCTAGAACGTAAGATGACTTTGAAGGAAATTCTTGAGACTACTCATTTCAATGGACTTTTGAAGAAGAGTCCTGTCAGAGAGCATAATGTTTATGTCCATCCTTCCTTTGATGCACACTACAAACATGGTGATTTACCTCCTATTGTACTTATGAAACCTCGATGTAGTCCATATCAGGAATGTGTGAACAGTTATGACCATGTTGTTCCTCCAGAAAAGTTATCCCTCAGAAATCTAAAAGCAAAAGCTGCCCCTTCCAAAGTGTTCCAACACAAGGAAGACTCAACCACCAACGTGGGGAGAAAAATGGAAGAACATTTATCCAAAAGGCTTACCAAAGAGGAAAGAACTAAGCTCGTCAGAGAGGTTGTGGAGTTGAAGGAGAAAGAAATCAAGCCTATTGAAAATGAGAAGGCTCCAGGAGGTAAGGTAAGACTGCCTAGTCATTTCAGTCACAAATCACATGTAAATGAAACTGCTGATAGAAAAGCTAAGGTAAAGACCATTGCCACTAGTAGAAAGCTTTCAGAAAAGGAGGTTTCAAAACCCAAACATCAACAACAAAATCTTATACCAGTAGTTGAGGTTTCGAAACCCAAAGTTGTGACAAAATCCCAAGAAGATCAAGGAGAAATAAGCTCTACAAGTACCAAGATTAGGAAGCCACAGAGTGGCTCCCGAAGTGAAAAGAATGAGACTCCCAGCAGAAAGAGCACTGTTTCAAATTCAAATACCATATCAAAACCAAAGAGCCAAAAGATTACTTATTCCAAGGAACAGAATAAGAAACAGATGAAGAAGCAAAAGCCTGCTGTTGCTGAGCCTGAAGCAGCTAAACCAGTCGATCAACAGTTAGGCCAAGAAGAAGCAATGAGTGTTGCTGTTTCTCATAAAGATGATTGCCCTGAGATTAGAATAATAACTACAATAGCAGATGATCTTGCGATGGAGCATGAAGAAGTATATGCATCTGCAAGTAAGATTAGAGTTTCTGAGCAAAACCAGAGTTCTTCTAGTGATGATTACTTTATGCTCAAGTCTGAACATGAAAATGATATCATTCTTGCTGAGAAAGCTCATGACAGCATCAATATCAGTGAAACAGATTACAAGGCTGACAAAGAGAACTCCGAGCTTAAATATTTGCTTCTGACAAGTCAATCATTTATTGAGCATGCAGAGAAGTTCCTCAATCTTGATGTTGACTGTCCCAAGCTCCTACCAAAAAGTGAAACTAAGCGAATATCCAATCTCTTACTCTTTTTGGACTGTGCAAATGAAGTCACTGAGCGTAAAAGCTTGCAGGGATCACAAGCAGTTAACCCTTTATTGCTAACTTGTGCGGGGAATCCAAGATTGCACATTTCTTTAGGGAGGTTGGTTGATGAAGTGTGTAGTGCCATTGAGAATCTAACATCTTACAGTGAAAAAGTGGCTTCAGATAATATATATGCAATGATGGAGAGAGATATAAAAGGAAACAATGGACTGATGAATGGAATATGGAACTGGGGTTGGAGGCATGGATTTTCTGCAGATGAAGCTGAGCAAGTTGTGAATGAAGTAGAGAACCTAGTTTTAGGTGGATTGATTGAAGAGATAATTGTAAATTTATGA 2505 0.4036 MYKPFMTCDDPKGVVECGAIRKYRTSSQKMKDKTKTRRPAETSLANKQDKEEKVSKGSAERSFDPSSLQLMEVSRGAQRLNNMIDSWSRGLMYDGSSEDIAKDLLKGALDLQESLLMLRKVQEASQHMATLKRRQNGKPESSRFDAMPVDGTAHCDHFGEQSYPMGFRRRWPSADGSSSSCTEELKKVIKESLVSQNLFKTTEGLDSSSTFHSTNSSQSSGAWNDKLSDSSFSPTTSRRERRSNLVAKLMGLEEAPSRSFPAIIQKQLASPKILNQKRHVFDIDMPKVRKNVENVSLERKMTLKEILETTHFNGLLKKSPVREHNVYVHPSFDAHYKHGDLPPIVLMKPRCSPYQECVNSYDHVVPPEKLSLRNLKAKAAPSKVFQHKEDSTTNVGRKMEEHLSKRLTKEERTKLVREVVELKEKEIKPIENEKAPGGKVRLPSHFSHKSHVNETADRKAKVKTIATSRKLSEKEVSKPKHQQQNLIPVVEVSKPKVVTKSQEDQGEISSTSTKIRKPQSGSRSEKNETPSRKSTVSNSNTISKPKSQKITYSKEQNKKQMKKQKPAVAEPEAAKPVDQQLGQEEAMSVAVSHKDDCPEIRIITTIADDLAMEHEEVYASASKIRVSEQNQSSSSDDYFMLKSEHENDIILAEKAHDSINISETDYKADKENSELKYLLLTSQSFIEHAEKFLNLDVDCPKLLPKSETKRISNLLLFLDCANEVTERKSLQGSQAVNPLLLTCAGNPRLHISLGRLVDEVCSAIENLTSYSEKVASDNIYAMMERDIKGNNGLMNGIWNWGWRHGFSADEAEQVVNEVENLVLGGLIEEIIVNL* 835
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra1g0524 834 MobiDBLite consensus disorder prediction 25 59 - -
Vra1g0524 834 MobiDBLite consensus disorder prediction 25 65 - -
Vra1g0524 834 Coils Coil 405 425 - -
Vra1g0524 834 MobiDBLite consensus disorder prediction 531 550 - -
Vra1g0524 834 PANTHER OS01G0228800 PROTEIN 1 832 - -
Vra1g0524 834 MobiDBLite consensus disorder prediction 502 518 - -
Vra1g0524 834 MobiDBLite consensus disorder prediction 204 240 - -
Vra1g0524 834 MobiDBLite consensus disorder prediction 551 569 - -
Vra1g0524 834 MobiDBLite consensus disorder prediction 430 581 - -
Vra1g0524 834 PANTHER OS01G0228800 PROTEIN-RELATED 1 832 - -
Vra1g0524 834 MobiDBLite consensus disorder prediction 447 480 - -
Vra1g0524 834 Pfam Domain of unknown function (DUF4378) 706 829 IPR025486 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra1g0524 Vra-Chr1 6191266 6195608 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra1g0524 675 831 TRM (TON1 Recruiting Motif) Superfamily AT3G24630 35.119 5.99e-21 96.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra1g0524 - - gmx:100797863 1273.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g3248 7 52070075 52074793 Vra1g0524 1 6191266 6195608 PCT