Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra1g0473 ATGGTATTGCTGGTTGCACTTGCATTGCTTCTGGGTCTCTTCCTCGCTGTTCTTCTTTTCAACCCACGACACCGCAAATCTGGGCACGAGGGAAAAGCTCAAACCAGTTTAAACAATGATAAGACATCAAAATCCTACAGTAAAACGGAAGTTTCATTGCATAACAAGAGAACAGATTGTTGGATAATCATCAAGAAAAAGGTATATGATGTTACCTCTTATGTGGAAGAACATCCAGGTGGTGATGCCATTCTAGCACATGCTGGAGATGATTCGACTGAAGGATTTTTTGGACCACAGCACGCAACTCGAGTATTTGACATGATTGAAGACTTCTACATTGGAGATTTGGGACAATAG 360 0.4139 MVLLVALALLLGLFLAVLLFNPRHRKSGHEGKAQTSLNNDKTSKSYSKTEVSLHNKRTDCWIIIKKKVYDVTSYVEEHPGGDAILAHAGDDSTEGFFGPQHATRVFDMIEDFYIGDLGQ* 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra1g0473 119 Gene3D - 35 119 IPR036400 -
Vra1g0473 119 PRINTS Cytochrome B5 signature 68 78 IPR001199 -
Vra1g0473 119 PRINTS Cytochrome B5 signature 78 92 IPR001199 -
Vra1g0473 119 PRINTS Cytochrome B5 signature 105 117 IPR001199 -
Vra1g0473 119 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 41 117 IPR036400 -
Vra1g0473 119 SMART Cyt_b5_2 46 118 IPR001199 -
Vra1g0473 119 Pfam Cytochrome b5-like Heme/Steroid binding domain 48 117 IPR001199 -
Vra1g0473 119 PANTHER CYTOCHROME B5-LIKE PROTEIN 4 117 - -
Vra1g0473 119 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 43 118 IPR001199 -
Vra1g0473 119 PANTHER CYTOCHROME B5 4 117 - -
Vra1g0473 119 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 74 81 IPR018506 GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra1g0473 Vra-Chr1 5706000 5708658 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra1g0473 3 117 NADPH P450 reductases AT1G60660 61.667 1.01e-50 155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra1g0473 - - gsj:114389651 208.764